Data used in analysis

ASV Count Table
ASV Count Table
LMiller_00458.BAL LMiller_00459.BAL LMiller_00461.BAL LMiller_00462.BAL LMiller_00463.BAL LMiller_00466.BAL LMiller_00467.BAL LMiller_00468.BAL LMiller_00469.BAL LMiller_00473.BAL LMiller_00474.BAL LMiller_00476.BAL LMiller_00477.BAL LMiller_00481.BAL LMiller_00458.Swab LMiller_00459.Swab LMiller_00461.Swab LMiller_00462.Swab LMiller_00466.Swab LMiller_00467.Swab LMiller_00468.Swab LMiller_00469.Swab LMiller_00473.Swab LMiller_00476.Swab LMiller_00477.Swab LMiller_00481.Swab
3093cc8f14899ad0a903ad74583c1bed 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
f93c45431d741ea9c35fbce351cf9514 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1b98b00b0fc819488d76aa0c09d57bcc 0 0 0 0 0 0 6 38 0 0 0 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0
09f9294499192d4eecf29e85501cc425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 15 62 0 0 17 0 47 97 0
86fc22982da07ab2a62935194f7c6f7d 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 21 76 0 0 0 0 0 14
65b2fb4442cdc2200be457cce105df9d 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58 455 0 0 0 0 0 0
e63dfdbc2865ef713259926ddf0177d2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 181 0 0
164888579b3fc5fa594b1a3f92f6be9e 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 231 0 0 0 0 0
5f78c6469abc75369906f18cf0642d99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 531 0 0 50
53f35fbed6b19a16f807663858c1fa87 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
d48197bd92b8c6a3f172ac4dd30d91eb 0 0 0 0 0 4 0 0 0 0 0 0 0 0 438 42 35 70 120 101 82 80 112 70 62 45
fc8675312fba62140c723a9429998935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0
8b33fbebe288284c0dbd87b16f900e55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 32 0 0 0 0 0
eabdd9c6aafdfef7838ebf30c547c9d1 0 0 0 0 0 0 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
e104c243ea51ee7b69c455fabfd7dad7 0 76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1bdad0b4f050c7cbdd63f50b2e03fba7 90 2503 563 41 562 21 740 587 490 35 116 615 288 218 0 0 0 0 0 0 0 0 0 0 0 0
a64d7739eca07ac196f81d593895fb85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 0 0 0 0 0
daf2e8915db65fd0667cfb7ac598f6c5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 91 18 0 0 0 0 12 0
16b5557da675aa2b9f51caa7bf36581c 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 95 0 0 0 0 0
abb93be57b1955eb8b72b962a1718ec9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 146 0 0 0 0 0 0 0
2a13ffc871287f78ec30a99e4b411039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 120 0 11 114 124 0 0 0 0 0 9
ad438df65d7ef791daf65c44cb24044a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0
4b1ac280cc66f5e47268dc0d33312255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 605 53 0 104 0 0 23
2923feeb11dc42c2f0cb11cdbb8755c9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 30 0
dd7c265161dab3b6c1a7b745a32e4d31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 258 126 87 0 0 20 30 0
74c209388c56ee5a93fa225d6f973396 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 122 61 0 0 0 17 0 0
099b8896f5c84538317d75c69d8422e5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 269 0
0436cf47bb12fc3027d94c39ae4d828a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 102 546 0 0 0 0 47
d04164791bd6b9ffcdf5b33ee129c6b5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 56 832 2611 211 42 28 320 0 0
f5e56e5421fe77fa207c8c6c4c16a4fb 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 251 66 0 0 38 0 17
160db545d9379a772525027e489d8ef2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 142 345 0 0 26 0 0 0
75ed11f48189490dbb158e1e7e27b167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 0 0 363 132 76 0 0 0 0 0
36c80daae98d2dc716916ade3e852047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 213 298 61 0 0 0 0 0
a82d1e0712d504e0239634e3e5321438 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 15
697c3c5367c73e389a9a034ce1d7b737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 17 0 0 0 0 0
d60593a75368eb2dd66ecbbec3313863 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
f5ffd05c1e22f1cdcd3e9f384e8cb317 0 0 0 0 0 0 0 75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
290a870c0b153a6f31aa38df81ae5e9d 0 25 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
416f578790b3f0667464e5cc97464a55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 25 0 0 0 8 0
647d11bd18aab6cfb71a394ecdab0c27 20 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0
b26833da2db0de54b3c32954c30fa48b 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
b70052f1527ee64b4d266d671f5a14c3 198 0 25 0 9 108 0 0 0 8 0 0 548 33 5929 0 9 2380 33 206 1271 21 2571 444 3966 223
401a1c628ed64d8c9241b7082e2cda0f 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
f278701143062813b9855df7e5c03f24 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
426a58d7fde254d8ff01fac25e36ff0e 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 9
d1934d7c94c720cfef10dcdda067a628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0
4fad8f0426e8eda5207b78b5e76cc3c4 0 0 0 0 0 0 0 0 0 0 0 0 45 0 131 13 0 0 52 147 126 0 2392 0 1277 0
0a21726cd4952a96635576553da67787 226 0 0 0 0 500 0 0 0 0 0 0 309 0 224 0 150 1698 736 0 453 0 168 275 2463 49
8ace2448befe36dc39fce9ad15a39983 0 0 0 0 0 0 0 0 0 0 0 0 240 0 0 0 0 0 0 0 0 0 0 0 0 0
46412791f6227728741db1fac098dc23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71 0 0 16 0 0 0 0 55 0 1980 9
d3bd11fd8f3cbbc4c15c2aec85761131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0
00d4ed68e73301c40a34c5f4e70aa342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39
baa3ee92750f65a79400a3496948666f 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
f32f77adf5200e164c25fc750b1316b9 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
d150d6fad77ceca71da50f4a347bbdee 0 60 89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
df37b62e507e32409df4885c1ad2ce14 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0
bd4bbed1242b5b5d6432dd913258b691 0 0 67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
9ba6fd3e1c6b40ecd8c1dc35a6836c79 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
e6254f3b5a16e0b168db873d5ca3b1ca 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
fb3bfadb9daebbae195a2fe1dfe318e6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 158 0
0b9121c5f4cc15f1ff7b5509946137e6 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0 0 0 0 0 0 0 0 0 0 0
87f48a9d781c3b72abf3fa92f896f2f7 36 0 0 0 0 50 0 0 0 0 0 0 0 0 150 0 0 0 97 0 0 0 0 0 0 0
b7d858871c56b4130c6556ce3f29fd20 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
d81947531814a1fe71c12a67d3cc5c2f 0 159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
da6a7cba87e0895b9cbe6037b9bd8b3b 24 481 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 34 21 0 14 27 0 0 29 0
675c847bccbc53942ebb7b8cbb4efc4d 0 679 0 33 0 0 0 0 0 0 0 0 0 0 45 36 20 0 0 0 0 0 32 0 0 0
f33bfd8864ae5b60963b8b929de87561 0 59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
77fc8c8486167edc801c5043afff5886 0 125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
9441ebd7d976e935bd4f3f85ad6b9cd5 0 78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
c890ba30bf6a001d11929e3d668b59ad 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26
26931bf4bb8670b19ce17f4ac2eb65d2 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
712f610d95151fd7db44bd3a13e3ad15 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
32f8fd11d2bee278d609a1d4ab767554 0 0 0 0 0 0 0 0 0 56 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0
6d2fe5e4cd55c89c512f6cd275e19a0f 0 0 0 39 0 0 0 0 0 0 0 0 264 0 0 0 0 0 0 0 0 0 0 0 42 0
116b000bcdd330f4319bda48bd997abf 3 56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
23b8bac0a94108cbf1f74ab89aec965b 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0
f0801df3310d0f06c07a96b1a2542be0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
cbef40f459197faa8de7bba6a4764a34 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3f12a0e59a953a1871265f6f4fa579f9 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
84f78f5ce68484506a620a9c8d2e2acf 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 17 0 28 0 0 0 0 12
510fc7ce79e4b9d729b7c819bf9e11c0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0
49c9253965d56bb180d4f561cf8d84e8 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4cddc40fdec49f4b0ff037423eb87508 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
69e34725046181e6cd5f33d9fb348af5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0
e63ffa8bebe9df680f70be3bef91764a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 190 0 0 0 65 3400 0 363 0 0
f2962123bb8adaeb1b746ef8a4f7f836 136 66 14 22 0 585 0 28 0 13 0 75 568 0 3220 0 672 2270 3141 4138 5500 4933 771 1422 3084 432
53574d96bc87bc4627cabdfd91d76f6b 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0
83e4a73079b72096bd9977dd7432d6c6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 118 0 0 0 73 0
456161d143404951deb16068641baa6a 418 0 0 0 0 188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
899befdfdfdd08fe72df5def771a14b3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 579 0 0 0 0 0 0
8e6a7b11fe615c61f76969d70ec45683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0 0 0 0 0
b72f553aef14f8ef9f2765e42c6b2d7a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 70 0 0
224102d609b83a172b11bd9115107f16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 237 0 0 0 0 0 0
7da9ea0ec3649a2fbfa3741ba3fa5f9d 0 0 84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8d781fd45124d1e47ca5d12f6d6d4867 0 0 8417 0 0 2242 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1a794428f534b81a86ddc63868ee5c79 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
f7abb471a96bfa8f310a879a94b3c40c 15 265 0 7 27 0 40 77 25 0 0 12 25 20 0 0 0 0 0 0 0 0 0 0 0 0
6539cdf264635d79b1ab259dd5b3b4f0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0e4b96294f2a2985a5d7fd8c87f7ce6d 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3fcc25b2980ff3e947b58c198106dd41 0 0 0 0 0 0 136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
9ec111134b7f857a1d270b470fbf331e 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0
c93b4ca3ad027d51d34b0a709e5c8e7d 0 0 0 0 0 0 0 63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
740d90e488e102d30a456e0be1424529 51 466 321 109 294 73 276 291 99 0 32 613 786 94 0 0 0 0 0 0 0 0 0 0 0 0
05af8312a092f309b269c945433c8793 0 0 106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
38b148b47cb8a9c1f05e1acbd1aede41 0 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
660d9218a1dcdd1a2c76772bd32a09e3 0 0 0 0 0 0 0 0 0 0 0 85 0 0 0 0 0 0 0 0 0 0 0 0 0 0
534a87137f5cda736f0a6c2b284feeb4 0 0 0 0 0 0 0 104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
e66c2bc92d5b9f582ab65e1b557566d0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
bf35f4019fc184fb342f34cc388ae989 123 273 444 0 73 0 83 390 80 79 0 345 300 132 0 21 5 0 0 0 0 0 0 0 0 0
700ccbd453cc5809e234cee03ff7441d 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0 0 0 0 0 0 0 0 0 0 0
b0c70610dfa252ae7d04f3c8703cc487 0 72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2b469462420172d5e0cbd09f01470284 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ff6211d2bd501975fa7f02a82e9941ce 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0
cb1c6b2a65a978f942ed88a1a18a647d 0 17 0 6 46 0 0 256 0 0 0 14 0 90 0 0 0 0 0 0 0 0 0 0 0 0
98489635e6eb9f5984ffa6a09550122b 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1e0534062d4980cfbf7b2f7527fd3096 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ea74b1e5fc10fb3a74f2825d6865d740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0
139e832c69fb177d68bb0f5cb8594845 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0
26973a1da4599bd0f344655b62b2cc23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 20 0 0 0 0 0
c3a43e9dca56be145dbc08c893128e6f 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
70bd26abb09389c3b2492d86d40898cf 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2c7f71a361403e18f79bf7f4cf3afb87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36
64ad135aaec0335a493399455ed5dd14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 7 0 0 0
aebd127d4e002a91e72bae5f02ee1463 0 0 0 0 0 0 0 0 0 0 0 214 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2761fe77546517a10b961f626feca59d 0 0 0 0 0 24 0 0 0 0 0 0 21 0 163 0 7 25 103 0 131 0 0 0 301 0
98aa7bb57619ef31b3aab7b8282b3451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61 0 59 0 0 2 37 0
6e3e062d65c1b047950a2492118eb70b 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23
6128c061f0201a07dcabe9199a0ba49e 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3f6e11d7ef2402e8727aa06d29ce24c1 0 0 0 65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
95bad341693ce7adba4d4fe762e8f5b2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0
4ab6728d229767ccc5829b0a3b8f139f 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
d0927320ada446780d3e125cc548c9ac 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
92492a89b08d1e29404c35ba08f01f68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0
2a1a15bcb8089042a9bd96f11747c526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0 0 0 0 0
ab65dc9c8cb103472dad8df3ad2206a1 134 0 0 0 0 45 0 0 0 0 0 0 180 0 0 0 78 101 148 0 0 0 0 0 121 0
8e8a8f851ead3233a07f8cda15142885 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
7a2968d1b152960ec255d04de612f814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2233 0 0 0 0 0 0 0 0 0 0 0
9e27a916ef961771585cc4ef459ca828 50 108 355 155 137 122 69 915 160 54 10 700 0 115 0 13 0 0 0 0 0 0 0 0 0 0
adf49f9046706086b08d4e1eda46525c 0 0 0 0 0 0 0 210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
714a83fc11043748846e425804b7603c 0 0 0 0 0 0 0 161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1c5ca49e54e39bfb1568413868a6641b 0 137 0 0 0 0 0 154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
c03cfb7503bfe54dba9844581c0da167 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0 0 0 0 0 0 0 0 0 0 0
ad027c2e39f567f099ca4fe43e6bcd80 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0
fbb87e6cb86026e699477563fd6291aa 0 0 0 0 0 0 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0 0
891ec38db10d8b723d730ef81aa400cb 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0 0 0 0 0 0 0 0 0 0
72827c994953a87988555b1752c3d2fe 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8472a38a835527bbe16679f89f9e0bc8 0 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
37125fc6b7326af0e29ddb765d441528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0
6c8eb978a6a72481eb1f4bfdfdc51a30 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
7beb3425166d777b19384223e61aa36a 0 0 89 0 0 0 0 132 0 0 0 114 0 0 0 0 0 0 0 0 0 0 0 0 0 0
c885cae6737b13185173764ee4fde3cd 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3df21e281098635b028cc08fb4c77017 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
7c2e801ea02e95945967ebb60d9e0637 0 0 0 0 0 0 0 0 0 0 0 0 77 0 0 0 0 0 0 0 0 0 0 0 0 0
12274abadf66a2ac2a2647bbb9bc6f43 32 0 0 0 0 0 0 0 0 0 0 0 0 0 1188 673 195 112 293 3596 1248 58 819 194 406 128
19110865bea32f92d7e104089a2e9bf7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 157 0 0 0 0 0 0 0
a98d48f8af741cfcb131c0cd46be9bab 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 273 0 0 0 0 0 0 0
76f41a937195b523b4afa4cdfd68d994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 140 0 0 0 0 0
e6d24e918a1de879ec63c45791adbdf2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 102 0 0 0 0 0
a97f91b77ce7550a71df88ab38ddc5fd 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 0 0 0 0 0 0 0 0 0 0 0
8674dcf0cfe35939037fa9a5b986866f 0 54 0 0 0 0 0 0 0 0 0 0 0 0 360 0 0 0 328 0 0 0 666 0 183 59
f4e78e2e397dc8bd3ca2f87c245a8773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 640 544 0 153 1366 3248 1463 116 414 1914 668 0
8cb7a412b46a1563748668bbdccbed58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 585 1300 0
4a9b8bd29a743ada239277431b6b9cc0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 343 0
b39a10230a9863e6b8d1e6d9504f1c4a 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0 41 0 0 0 0 191 0 0
55556a9e46695b3de727d17be82bf4d9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0
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85c44c83eddc5d3028261a1000b7d0e1 164 206 0 0 0 90 8 0 0 549 0 63 413 34 1146 448 1105 502 380 174 782 1008 1719 415 476 804
b03d2e5ac94c7a0d115e5c542e9315e8 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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06f825b512d903b9230e1a55d87359ee 39 24 29 0 1252 0 0 0 24 71 0 58 33 0 266 697 251 58 221 1023 170 138 1022 1480 375 150
55b7b7586b6252b87981f170d6ac11c5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 206 0 298 35 0 0 110 415 958 221 211 1430
b4fd80c189d9f173e66fcea1caf8111e 1974 0 0 34 0 181 0 155 0 2412 0 163 515 0 1268 1096 5849 1507 435 312 1833 788 1049 504 279 4754
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41c50945f46692bc4a1552bfcb20f397 508 511 0 0 85 89 0 157 25 645 0 65 0 0 374 286 2405 453 2433 259 277 645 99 1368 336 6227
94b8f960aa3adb2f6f23adf0c26e6058 0 0 0 0 0 126 0 0 0 0 0 0 39 0 76 0 0 0 129 0 418 145 0 0 58 0
5179a2d863129db0480a654447b8b62b 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 523 0 0 0 0 0 0 0 0 0
edc9e5c16e40aff1eadce6597940f08f 73 0 56 0 570 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
492d3ad15aeb63c93e1c94ed7853f5af 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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027cc4e57f832f6792df8fc21ffd9bbb 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0
4ba7a78de011ba7897f307038d1e1bab 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57 0 86 0 0 0 0 0
1b51357852b0b814b4d9918c6f0ab762 0 58 0 0 0 0 0 0 0 42 0 0 0 0 0 676 0 0 0 0 79 209 156 0 0 0
39414efe8e809129734b7c33d06c42b7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 101 2075 263 40 314 397 283 282 111 205 88 218
9fec7bdd6bd88e710bd69b15692e54a0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0 0 0 0 0 0 0 0 0 0
860d345a8b6afb765a0e588654f08c1d 410 144 0 0 0 0 0 78 0 0 0 0 0 0 93 424 0 171 20 0 0 228 0 237 0 0
e7cfd084265c4df4856ca07b1c9b24ee 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17
d58e3747278152d2506e3587184efd10 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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ASV Taxa Table
ASV Taxa Table
Kingdom Phylum Class Order Family Genus Species
3093cc8f14899ad0a903ad74583c1bed k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Rikenellaceae g__Alistipes NA
f93c45431d741ea9c35fbce351cf9514 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Chishuiella s__Chishuiella_changwenlii
1b98b00b0fc819488d76aa0c09d57bcc k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Elizabethkingia NA
09f9294499192d4eecf29e85501cc425 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella s__uncultured_bacterium
86fc22982da07ab2a62935194f7c6f7d k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella NA
65b2fb4442cdc2200be457cce105df9d k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella NA
e63dfdbc2865ef713259926ddf0177d2 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella NA
164888579b3fc5fa594b1a3f92f6be9e k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella NA
5f78c6469abc75369906f18cf0642d99 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella NA
53f35fbed6b19a16f807663858c1fa87 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella NA
d48197bd92b8c6a3f172ac4dd30d91eb k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella NA
fc8675312fba62140c723a9429998935 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella NA
8b33fbebe288284c0dbd87b16f900e55 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Weeksellaceae g__Bergeyella s__uncultured_Bergeyella
eabdd9c6aafdfef7838ebf30c547c9d1 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Flavobacterium NA
e104c243ea51ee7b69c455fabfd7dad7 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Flavobacterium s__Flavobacterium_ceti
1bdad0b4f050c7cbdd63f50b2e03fba7 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Flavobacterium s__Flavobacterium_ceti
a64d7739eca07ac196f81d593895fb85 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
daf2e8915db65fd0667cfb7ac598f6c5 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
16b5557da675aa2b9f51caa7bf36581c k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga s__Capnocytophaga_granulosa
abb93be57b1955eb8b72b962a1718ec9 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga s__Capnocytophaga_granulosa
2a13ffc871287f78ec30a99e4b411039 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga s__Capnocytophaga_granulosa
ad438df65d7ef791daf65c44cb24044a k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
4b1ac280cc66f5e47268dc0d33312255 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
2923feeb11dc42c2f0cb11cdbb8755c9 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga s__uncultured_bacterium
dd7c265161dab3b6c1a7b745a32e4d31 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
74c209388c56ee5a93fa225d6f973396 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
099b8896f5c84538317d75c69d8422e5 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
0436cf47bb12fc3027d94c39ae4d828a k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
d04164791bd6b9ffcdf5b33ee129c6b5 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
f5e56e5421fe77fa207c8c6c4c16a4fb k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
160db545d9379a772525027e489d8ef2 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
75ed11f48189490dbb158e1e7e27b167 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
36c80daae98d2dc716916ade3e852047 k__Bacteria p__Bacteroidota c__Bacteroidia o__Flavobacteriales f__Flavobacteriaceae g__Capnocytophaga NA
a82d1e0712d504e0239634e3e5321438 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Paludibacteraceae g__F0058 s__uncultured_bacterium
697c3c5367c73e389a9a034ce1d7b737 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Paludibacteraceae g__F0058 s__uncultured_bacterium
d60593a75368eb2dd66ecbbec3313863 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Muribaculaceae g__Muribaculaceae s__uncultured_Bacteroidales
f5ffd05c1e22f1cdcd3e9f384e8cb317 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Muribaculaceae g__Muribaculum NA
290a870c0b153a6f31aa38df81ae5e9d k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
416f578790b3f0667464e5cc97464a55 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Tannerellaceae g__Tannerella NA
647d11bd18aab6cfb71a394ecdab0c27 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Tannerellaceae g__Tannerella s__Tannerella_forsythia
b26833da2db0de54b3c32954c30fa48b k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Tannerellaceae g__Parabacteroides NA
b70052f1527ee64b4d266d671f5a14c3 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas s__uncultured_bacterium
401a1c628ed64d8c9241b7082e2cda0f k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
f278701143062813b9855df7e5c03f24 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotellaceae_Ga6A1_group s__uncultured_bacterium
426a58d7fde254d8ff01fac25e36ff0e k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella s__uncultured_Bacteroidetes
d1934d7c94c720cfef10dcdda067a628 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella s__uncultured_Bacteroidetes
4fad8f0426e8eda5207b78b5e76cc3c4 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella NA
0a21726cd4952a96635576553da67787 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella NA
8ace2448befe36dc39fce9ad15a39983 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella NA
46412791f6227728741db1fac098dc23 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella NA
d3bd11fd8f3cbbc4c15c2aec85761131 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella NA
00d4ed68e73301c40a34c5f4e70aa342 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella NA
baa3ee92750f65a79400a3496948666f k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Alloprevotella NA
f32f77adf5200e164c25fc750b1316b9 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Bacteroidaceae g__Bacteroides NA
d150d6fad77ceca71da50f4a347bbdee k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Bacteroidaceae g__Bacteroides s__uncultured_bacterium
df37b62e507e32409df4885c1ad2ce14 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Bacteroidaceae g__Bacteroides s__Bacteroides_coprocola
bd4bbed1242b5b5d6432dd913258b691 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Bacteroidaceae g__Bacteroides s__Bacteroides_barnesiae
9ba6fd3e1c6b40ecd8c1dc35a6836c79 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Bacteroidaceae g__Bacteroides s__Bacteroides_coprocola
e6254f3b5a16e0b168db873d5ca3b1ca k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotellaceae_UCG-001 NA
fb3bfadb9daebbae195a2fe1dfe318e6 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
0b9121c5f4cc15f1ff7b5509946137e6 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
87f48a9d781c3b72abf3fa92f896f2f7 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
b7d858871c56b4130c6556ce3f29fd20 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
d81947531814a1fe71c12a67d3cc5c2f k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
da6a7cba87e0895b9cbe6037b9bd8b3b k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
675c847bccbc53942ebb7b8cbb4efc4d k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
f33bfd8864ae5b60963b8b929de87561 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
77fc8c8486167edc801c5043afff5886 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
9441ebd7d976e935bd4f3f85ad6b9cd5 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__uncultured s__uncultured_bacterium
c890ba30bf6a001d11929e3d668b59ad k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
26931bf4bb8670b19ce17f4ac2eb65d2 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella s__Prevotella_histicola
712f610d95151fd7db44bd3a13e3ad15 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
32f8fd11d2bee278d609a1d4ab767554 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella s__Prevotella_melaninogenica
6d2fe5e4cd55c89c512f6cd275e19a0f k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
116b000bcdd330f4319bda48bd997abf k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
23b8bac0a94108cbf1f74ab89aec965b k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella s__Prevotella_falsenii
f0801df3310d0f06c07a96b1a2542be0 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella s__Prevotella_pallens
cbef40f459197faa8de7bba6a4764a34 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella s__Prevotella_pallens
3f12a0e59a953a1871265f6f4fa579f9 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella s__Prevotella_paludivivens
84f78f5ce68484506a620a9c8d2e2acf k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella s__Prevotella_shahii
510fc7ce79e4b9d729b7c819bf9e11c0 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
49c9253965d56bb180d4f561cf8d84e8 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Prevotellaceae g__Prevotella NA
4cddc40fdec49f4b0ff037423eb87508 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Bacteroidaceae g__Bacteroides NA
69e34725046181e6cd5f33d9fb348af5 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas s__uncultured_bacterium
e63ffa8bebe9df680f70be3bef91764a k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
f2962123bb8adaeb1b746ef8a4f7f836 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
53574d96bc87bc4627cabdfd91d76f6b k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
83e4a73079b72096bd9977dd7432d6c6 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
456161d143404951deb16068641baa6a k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
899befdfdfdd08fe72df5def771a14b3 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
8e6a7b11fe615c61f76969d70ec45683 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
b72f553aef14f8ef9f2765e42c6b2d7a k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
224102d609b83a172b11bd9115107f16 k__Bacteria p__Bacteroidota c__Bacteroidia o__Bacteroidales f__Porphyromonadaceae g__Porphyromonas NA
7da9ea0ec3649a2fbfa3741ba3fa5f9d k__Bacteria p__Bacteroidota c__Bacteroidia o__Chitinophagales f__Chitinophagaceae g__Filobacterium s__uncultured_bacterium
8d781fd45124d1e47ca5d12f6d6d4867 k__Bacteria p__Bacteroidota c__Bacteroidia o__Chitinophagales f__Chitinophagaceae g__Filobacterium s__uncultured_bacterium
1a794428f534b81a86ddc63868ee5c79 k__Bacteria p__Bacteroidota c__Bacteroidia o__Chitinophagales f__Chitinophagaceae g__Aurantisolimonas s__metagenome
f7abb471a96bfa8f310a879a94b3c40c k__Bacteria p__Bacteroidota c__Bacteroidia o__Sphingobacteriales f__Sphingobacteriaceae g__Sphingobacterium s__Sphingobacterium_spiritivorum
6539cdf264635d79b1ab259dd5b3b4f0 k__Bacteria p__Bacteroidota c__Bacteroidia o__Sphingobacteriales f__Sphingobacteriaceae g__Pedobacter NA
0e4b96294f2a2985a5d7fd8c87f7ce6d k__Bacteria p__Bacteroidota c__Bacteroidia o__Sphingobacteriales f__Sphingobacteriaceae g__Pedobacter NA
3fcc25b2980ff3e947b58c198106dd41 k__Bacteria p__Bacteroidota c__Bacteroidia o__Sphingobacteriales f__Sphingobacteriaceae g__Pedobacter NA
9ec111134b7f857a1d270b470fbf331e k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Helicobacteraceae g__Helicobacter s__Helicobacter_fennelliae
c93b4ca3ad027d51d34b0a709e5c8e7d k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
740d90e488e102d30a456e0be1424529 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
05af8312a092f309b269c945433c8793 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
38b148b47cb8a9c1f05e1acbd1aede41 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
660d9218a1dcdd1a2c76772bd32a09e3 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
534a87137f5cda736f0a6c2b284feeb4 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
e66c2bc92d5b9f582ab65e1b557566d0 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
bf35f4019fc184fb342f34cc388ae989 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
700ccbd453cc5809e234cee03ff7441d k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
b0c70610dfa252ae7d04f3c8703cc487 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
2b469462420172d5e0cbd09f01470284 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
ff6211d2bd501975fa7f02a82e9941ce k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_canadensis
cb1c6b2a65a978f942ed88a1a18a647d k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter NA
98489635e6eb9f5984ffa6a09550122b k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter NA
1e0534062d4980cfbf7b2f7527fd3096 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter NA
ea74b1e5fc10fb3a74f2825d6865d740 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter NA
139e832c69fb177d68bb0f5cb8594845 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter NA
26973a1da4599bd0f344655b62b2cc23 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter NA
c3a43e9dca56be145dbc08c893128e6f k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_showae
70bd26abb09389c3b2492d86d40898cf k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter NA
2c7f71a361403e18f79bf7f4cf3afb87 k__Bacteria p__Campilobacterota c__Campylobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter NA
64ad135aaec0335a493399455ed5dd14 k__Bacteria p__Patescibacteria c__Saccharimonadia o__Saccharimonadales f__Saccharimonadales g__Saccharimonadales s__TM7_phylum
aebd127d4e002a91e72bae5f02ee1463 k__Bacteria p__Deinococcota c__Deinococci o__Deinococcales f__Deinococcaceae g__Deinococcus NA
2761fe77546517a10b961f626feca59d k__Bacteria p__Patescibacteria c__Gracilibacteria o_Absconditabacteriales(SR1) f_Absconditabacteriales(SR1) g_Absconditabacteriales(SR1) s__SR1_bacterium
98aa7bb57619ef31b3aab7b8282b3451 k__Bacteria p__Patescibacteria c__Gracilibacteria o_Absconditabacteriales(SR1) f_Absconditabacteriales(SR1) g_Absconditabacteriales(SR1) s__SR1_bacterium
6e3e062d65c1b047950a2492118eb70b k__Bacteria p__Patescibacteria c__Gracilibacteria o_Absconditabacteriales(SR1) f_Absconditabacteriales(SR1) g_Absconditabacteriales(SR1) s__SR1_bacterium
6128c061f0201a07dcabe9199a0ba49e k__Bacteria p__Spirochaetota c__Spirochaetia o__Spirochaetales f__Spirochaetaceae g__Treponema s__Treponema_berlinense
3f6e11d7ef2402e8727aa06d29ce24c1 k__Bacteria p__Spirochaetota c__Spirochaetia o__Spirochaetales f__Spirochaetaceae g__Treponema NA
95bad341693ce7adba4d4fe762e8f5b2 k__Bacteria p__Spirochaetota c__Spirochaetia o__Spirochaetales f__Spirochaetaceae g__Treponema s__Treponema_maltophilum
4ab6728d229767ccc5829b0a3b8f139f k__Bacteria p__Spirochaetota c__Spirochaetia o__Spirochaetales f__Spirochaetaceae g__Treponema NA
d0927320ada446780d3e125cc548c9ac k__Bacteria p__Spirochaetota c__Spirochaetia o__Spirochaetales f__Spirochaetaceae g__Treponema s__unidentified
92492a89b08d1e29404c35ba08f01f68 k__Bacteria p__Spirochaetota c__Spirochaetia o__Spirochaetales f__Spirochaetaceae g__Treponema NA
2a1a15bcb8089042a9bd96f11747c526 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
ab65dc9c8cb103472dad8df3ad2206a1 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
8e8a8f851ead3233a07f8cda15142885 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
7a2968d1b152960ec255d04de612f814 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
9e27a916ef961771585cc4ef459ca828 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
adf49f9046706086b08d4e1eda46525c k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
714a83fc11043748846e425804b7603c k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
1c5ca49e54e39bfb1568413868a6641b k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
c03cfb7503bfe54dba9844581c0da167 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
ad027c2e39f567f099ca4fe43e6bcd80 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
fbb87e6cb86026e699477563fd6291aa k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
891ec38db10d8b723d730ef81aa400cb k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
72827c994953a87988555b1752c3d2fe k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
8472a38a835527bbe16679f89f9e0bc8 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
37125fc6b7326af0e29ddb765d441528 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium s__Fusobacterium_mortiferum
6c8eb978a6a72481eb1f4bfdfdc51a30 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
7beb3425166d777b19384223e61aa36a k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
c885cae6737b13185173764ee4fde3cd k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
3df21e281098635b028cc08fb4c77017 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
7c2e801ea02e95945967ebb60d9e0637 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
12274abadf66a2ac2a2647bbb9bc6f43 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
19110865bea32f92d7e104089a2e9bf7 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
a98d48f8af741cfcb131c0cd46be9bab k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
76f41a937195b523b4afa4cdfd68d994 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
e6d24e918a1de879ec63c45791adbdf2 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
a97f91b77ce7550a71df88ab38ddc5fd k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
8674dcf0cfe35939037fa9a5b986866f k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
f4e78e2e397dc8bd3ca2f87c245a8773 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
8cb7a412b46a1563748668bbdccbed58 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
4a9b8bd29a743ada239277431b6b9cc0 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
b39a10230a9863e6b8d1e6d9504f1c4a k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
55556a9e46695b3de727d17be82bf4d9 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
fa531a9e5007f7d080e555401270d85a k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
17640594df4cfd68370b089d48efafab k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
c22748d04da2d352854a7b6da3bc4f34 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
eaec3537b269faaf09eedbfd87549aad k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
eec3c3e16ed3a0e51fe28353ed4f31e4 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
12941632fca9469f01b42e089244fb8d k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
24e4a3997e50367598b3152939b4fb75 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
46994e329da4f3393a8495036589323a k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
e2cf3eec6b1c75ee81133be07a767e65 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
bd17082ec008bea514740bddd3a285d6 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium NA
f7a9db5541f5b7ace4474c73743c0481 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__uncultured_bacterium
c15ba7772639f42c56f35e97e5e8d48a k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__Leptotrichia_goodfellowii
5f5a0dbcf08566abdec210b40919e80a k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__Leptotrichia_goodfellowii
1cb66d96ee53ad0464a7cf199f48a1a3 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__uncultured_bacterium
58bd2caa4af7ca54235a416d7ae32c8e k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__uncultured_bacterium
55cc2b7edaba30b1e9c7450b82f0cb2b k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__uncultured_bacterium
47aa48ec8ec154954dd2d49434737268 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__uncultured_bacterium
5c5b789d178e6f22d65adaeb35a995fc k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__uncultured_bacterium
a6fc343dd640208ff0816cdabec0426c k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__uncultured_bacterium
822042c1e061b6de469404b6cac56aa9 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__uncultured_bacterium
eb7bbc66c14e2e7e264e734b0f0c01b3 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
3eac8b038216422f95f2431ce4b2cf4e k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__Leptotrichia_wadei
6e1ee71cbf408dd92106150b93a0bfe1 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
06693622f18b0d17a3a760c463f71e05 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
c481f7cddfafbe8f143fea53336bea23 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
52cdd4c3305b200497e8f8061fecb13c k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
efe7cc345dac4c2359dcfda96d96376d k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
3918f2dc36192512a91b0ee0953b9387 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
e1338f53b51df73c057dd911212902fe k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
4d4571162fbae9d6ce602994a5dd2a9a k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
0cf6f47d179f04197b3594b915bb3b73 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__Leptotrichia_hofstadii
26d3b95fe6bb4427f481226f783047a4 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
ad6bc73d0dfe1b0bc3b7ca77e6f0a8dc k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
46b8f9281865478261657da375e28424 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
a375ce81db65e848c1f762344851193f k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__Leptotrichia_hongkongensis
6b15cd3552e3f49e35f1d88fc3fc76eb k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__Leptotrichia_trevisanii
b4d3722f3030aea9885a8a6fa72bdf01 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
56bec34febe4f9b1d5f58b4abe054b90 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
a556ae43f7add6af6faadb29fbbf1834 k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia NA
b0318249edbcc891c3774b7299ac3afd k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Leptotrichia s__metagenome
95f1b19195f23a58a9ecc445253a8a1c k__Bacteria p__Fusobacteriota c__Fusobacteriia o__Fusobacteriales f__Leptotrichiaceae g__Streptobacillus s__uncultured_bacterium
b0039e7430d2b8d443e507933f3075d7 k__Bacteria p__Patescibacteria c__Gracilibacteria o__JGI_0000069-P22 f__JGI_0000069-P22 g__JGI_0000069-P22 NA
0bb321a78fb1ebda6f414b285bc9ff42 k__Bacteria p__Patescibacteria c__Gracilibacteria o__JGI_0000069-P22 f__JGI_0000069-P22 g__JGI_0000069-P22 NA
384f663844f0b134b3d4b8aed83dfac0 k__Bacteria p__Firmicutes c__Bacilli o__Mycoplasmatales f__Mycoplasmataceae g__Mycoplasma NA
463448be7fe6ae1e5a096e746e6974c5 k__Bacteria p__Acidobacteriota c__Vicinamibacteria o__Vicinamibacterales f__Vicinamibacteraceae g__Vicinamibacteraceae s__wastewater_metagenome
4972757722cb02031094addcf082bb27 k__Bacteria p__Dadabacteria c__Dadabacteriia o__Dadabacteriales f__Dadabacteriales g__Dadabacteriales s__uncultured_candidate
32baf769cef5dfd68415214f4901ad8e k__Bacteria p__Latescibacterota c__Latescibacterota o__Latescibacterota f__Latescibacterota g__Latescibacterota s__saltmarsh_clone
46edd9a681a1c394007859666f76d477 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Xanthomonadales f__Rhodanobacteraceae g__Luteibacter NA
70869d0feda2b000386a1851bdfcaffe k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Xanthomonadales f__Rhodanobacteraceae g__Dokdonella NA
be74cad9381c15cfaa8e6071aa77e7f4 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Xanthomonadales f__Xanthomonadaceae g__Stenotrophomonas NA
6f7d59283d979b17a9834ab4c26d0076 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Xanthomonadales f__Xanthomonadaceae g__Stenotrophomonas NA
912f795ef3617aeb65ff9ad69b9567a8 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Xanthomonadales f__Xanthomonadaceae g__Stenotrophomonas NA
be97c9932a0a5035cac26dac49a66eb2 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Oceanospirillales f__Alcanivoracaceae1 g__Alcanivorax NA
970a0f4184a8820116f827e881f75110 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Legionellales f__Legionellaceae g__Legionella NA
60f05f9e5d7e74d85a0f74164adcbd07 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Pseudomonadaceae g__Pseudomonas NA
77a1e8bc25be2a0afd352762ed9497ce k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Pseudomonadaceae g__Pseudomonas NA
b4289ab0a9a00034c1fbce477b2c4ded k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Pseudomonadaceae g__Pseudomonas NA
86d6db0b6e15510fa5d27ceae8fd5e0d k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Pseudomonadaceae g__Pseudomonas NA
6376ea6dab7d0fde3cd66f53b57e1484 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Pseudomonadaceae g__Pseudomonas NA
637b9b3f4d1cbb1a10c07817619cdf69 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Pseudomonadaceae g__Pseudomonas NA
1e766995d5d899c5028f77afef6bff77 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Moraxellaceae g__Moraxella NA
3d59754994ad442a8c7e69589d74a6ce k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Moraxellaceae g__Moraxella NA
96536c137cc245cdb18aa943e30eba06 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Moraxellaceae g__Alkanindiges NA
85f7a5b552a1d4564bbfb316eafdf2bf k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Moraxellaceae g__Acinetobacter NA
a6be27329e6caf441973dafe2b0c303d k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Moraxellaceae g__Acinetobacter NA
19242d6e262c55c76fdde74fbd05d9ad k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pseudomonadales f__Moraxellaceae g__Acinetobacter NA
7b881ac7680c0ccc0253deb22f230e1e k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Rodentibacter NA
d998dd3fa19c17b739083a1ba1553dd1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Rodentibacter NA
1719b5b8f753472e4f4d58ec01a1693c k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Rodentibacter NA
53e8f34b14b34a85e09d2cad651f71ae k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Rodentibacter NA
08eea0c16a6996628e45a8f5ad6dbd75 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Rodentibacter NA
f057bbc717309187476ebe2dfaaf896e k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Rodentibacter NA
e56768537f475580b0a6214d82fbbd2c k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Rodentibacter NA
3778c8917a8a5499a2491f640765259b k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Rodentibacter NA
a7c6d28b5e1b2324721f2dff0e1e8fb5 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Haemophilus NA
e78ecb138a8bee2a728274b849db12c1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Aggregatibacter NA
6009d6fc8b150038745fe8ccf3cf5ef0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Aggregatibacter s__Aggregatibacter_actinomycetemcomitans
5a1f8ea54d04e18a7c14a5d2306a842f k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Aggregatibacter s__Aggregatibacter_actinomycetemcomitans
4bc29222703188e33f91bbc7f5e197cf k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Aggregatibacter s__Aggregatibacter_actinomycetemcomitans
d1330b8de9059f713830c82d88f3cc1b k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
1c6676f6f82c2c187e35a381043cd8a8 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
2e0b0e451c05867a0b6f53cc2647c3de k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
b444c203840973d0159068701564fceb k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
acff851a5437a518fdb83cffd7b43dae k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus s__Haemophilus_parahaemolyticus
0891a144fc69f813d70a273cb534b6b0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
ebb890eaad754182c5a491a7d6c3fb8b k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
09ea62c69c07eb44d971e83b2ce87219 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
59f7d8a7f37d6eeec95eb556f33da267 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
c1b603f83feeccc82b783143e3a970f9 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Actinobacillus NA
5249851d64d7ae50c21aee46d07f7b08 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__uncultured s__Bisgaard_Taxon
5a39170d65625048b4ff1a2465563092 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__uncultured s__Bisgaard_Taxon
b74d9f40f90058164720cbb8531c7c90 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__uncultured s__Bisgaard_Taxon
bc54df7b889fb90fadcb7f804d05d8a0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__uncultured s__Bisgaard_Taxon
9b9c893d7f6ce1adb95f07ce2c42960e k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__uncultured s__Bisgaard_Taxon
38185326e140564bb33e80e4f24b8f90 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__uncultured s__Bisgaard_Taxon
54c0b458c79be85647cd3cff8e66059b k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__uncultured s__Bisgaard_Taxon
5e433b20d9dee2171f80dad0383d8357 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Rhodocyclaceae g__Propionivibrio NA
a05aec2d8945f8d5c15e1575515202b7 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Burkholderiaceae g__Lautropia NA
f4801b7a68515d9005fa572ee6afdf41 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Burkholderiaceae g__Ralstonia NA
abd34643df4e48940286e05ff8518132 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Oxalobacteraceae g__Undibacterium NA
4608fae4bbc9964cdd17af8782f2155e k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Oxalobacteraceae g__Massilia NA
ca6c2b3b469c08212142e8821c65882a k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Oxalobacteraceae g__Massilia NA
8df2b2e6c1cb64bd18b81d5bae7f0898 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Oxalobacteraceae g__Massilia NA
dac91e8bb4941252d8a158fef91c04dd k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Alysiella NA
6ef289e78d35a0091f18292b3d49d471 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Alysiella NA
1ec3448328311caec18abb5e28c5cccf k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Kingella s__uncultured_bacterium
e1d4f1eb76345f33375935a9f39dbde1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Neisseria NA
b9036f07db75f286b5805c03c1ac4320 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Neisseria s__Neisseria_oralis
a713e827c5a2626f7505099dc81a21b9 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Neisseria NA
4f5efd25dacb5d639316e7291ff6ff8b k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Neisseria NA
53f6674af6b3540c68d03f52f706afc3 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Neisseria NA
f1860fe716257bd5fd5c4c6a16cf3b95 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Burkholderiales f__Neisseriaceae g__Neisseria NA
450eece0641870cd6ca54c9e5f0208e9 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Cardiobacteriales f__Cardiobacteriaceae g__Cardiobacterium NA
f1dba3ac75a97b30c9f63c29e7e64cc5 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Cardiobacteriales f__Cardiobacteriaceae g__Cardiobacterium NA
5737e058385a6a34a3bcfdec9f73df47 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Cardiobacteriales f__Cardiobacteriaceae g__Cardiobacterium s__uncultured_bacterium
bac3c0867719c02b3aba4b8343759c33 k__Bacteria p__Desulfobacterota c__Desulfovibrionia o__Desulfovibrionales f__Desulfovibrionaceae g__Desulfovibrio NA
74792adac452eb3544cdc17064d6bbee k__Bacteria p__Desulfobacterota c__Desulfovibrionia o__Desulfovibrionales f__Desulfovibrionaceae g__Desulfovibrio NA
12392e67db62c8e9a290f91ff957b2d2 k__Bacteria p__Desulfobacterota c__Desulfovibrionia o__Desulfovibrionales f__Desulfovibrionaceae g__Desulfovibrio NA
1a883863725eead9924f1c1ae4f7f3da k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Altererythrobacter s__Porphyrobacter_mercurialis
cb28c53c2cc535734f0575251909154c k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Novosphingobium NA
4b961b84716ac167392b11929d702643 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Novosphingobium NA
57c2dccb6adba677d7c6bfe138d887fd k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Sphingomonas NA
bcba47620c299fd34809f143e3d26dff k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Sphingomonas NA
b5c8ed4496d79b916859402cdf11f0a7 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Sphingomonas NA
9ac3bb1d7dedb08a012692a6f536b5af k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Sphingomonas NA
79d4aa809f431563e812c9b2bc8cdc82 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Sphingomonas NA
6df622888bb6fd97a26850973d17ca34 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Sphingomonadales f__Sphingomonadaceae g__Sphingomonas NA
fd9d6b3b6e91b427f130a704a3919d2e k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhodobacterales f__Rhodobacteraceae g__Paracoccus NA
645ff217bde3ad38899f4ef8c4d9acad k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Rhizobiaceae g__Mesorhizobium NA
b3291a2a85ebf15ba10983ef1ee0223a k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Devosiaceae g__Devosia NA
cbe9e5f34c7b6768d85759c1248cfddd k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Rhizobiaceae g__Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium NA
fc6622c636a5210293fb2873fc4761d9 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Rhizobiaceae g__Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium NA
b2bac62667dd5b7b46224f0fdf1b2265 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Caulobacterales f__Caulobacteraceae g__uncultured NA
7ad886bb493ed298c1778ec6a0597c5c k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Caulobacterales f__Caulobacteraceae g__Brevundimonas NA
a537d8bab85c83b0e74c73c55790324b k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Caulobacterales f__Caulobacteraceae g__Brevundimonas NA
8b9e18c3af0357ee00702396af81803b k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Caulobacterales f__Caulobacteraceae g__Brevundimonas NA
fca290ee2c3fa91836b16a633cf02585 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Caulobacterales f__Caulobacteraceae g__Brevundimonas NA
6326363cc12189a386d6c9e5c711038d k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Caulobacterales f__Caulobacteraceae g__Asticcacaulis NA
ab6b7b90747341ce39f82d0a22a1d37d k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Beijerinckiaceae g__Methylobacterium-Methylorubrum NA
c4f7f7d843eca4862537b5052067f2bb k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Beijerinckiaceae g__Methylobacterium-Methylorubrum s__Methylobacterium_jeotgali
3d3f89fadf28973358458a50d436e91e k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Rhizobiales f__Beijerinckiaceae g__Methylobacterium-Methylorubrum s__Methylobacterium_aerolatum
ebdf0e5fb071c5c630db42b089a088b7 k__Bacteria p__Proteobacteria c__Alphaproteobacteria o__Acetobacterales f__Acetobacteraceae g__Roseomonas NA
74c80747312f035e999fed9e4eb935a1 k__Bacteria p__Acidobacteriota c__Acidobacteriae o__Acidobacteriales f_Acidobacteriaceae(Subgroup_1) g__Terriglobus NA
fc365e75b4a6ab38eecb084ef709c308 k__Bacteria p__Armatimonadota c__uncultured o__uncultured f__uncultured g__uncultured NA
45285d514ae9b6a9bfc5d09b7863f6f8 k__Bacteria p__Acidobacteriota c__Blastocatellia o__Blastocatellales f__Blastocatellaceae g__Blastocatella NA
7b28c20e72c6c95b3e604f0849245770 k__Bacteria p__Verrucomicrobiota c__Verrucomicrobiae o__Verrucomicrobiales f__Akkermansiaceae g__Akkermansia s__Akkermansia_muciniphila
9a10a4240bbd0fb6b267de1cbc401651 k__Bacteria p__Firmicutes c__Bacilli o__Alicyclobacillales f__Alicyclobacillaceae g__Tumebacillus NA
3a73e4ba6c1efc15eceed959e5dfcd09 k__Bacteria p__Firmicutes c__Bacilli o__Alicyclobacillales f__Alicyclobacillaceae g__Tumebacillus s__uncultured_Firmicutes
7054b6ac948c1d9d17cfffc3ffafdc6a k__Bacteria p__Firmicutes c__Bacilli o__Alicyclobacillales f__Alicyclobacillaceae g__Tumebacillus s__uncultured_Firmicutes
a4eac9fcad4c5f9555c01a06d10b6fc6 k__Bacteria p__Firmicutes c__Clostridia o__Peptococcales f__Peptococcaceae g__Peptococcus NA
b39c18497ac6662fe9314617a0618b1c k__Bacteria p__Firmicutes c__Clostridia o__Peptococcales f__Peptococcaceae g__Peptococcus s__Peptococcus_simiae
e4fcc34b87d3eece6bf92cde47b63d84 k__Bacteria p__Firmicutes c__Clostridia o__Peptococcales f__Peptococcaceae g__Peptococcus s__Peptococcus_simiae
11ea0be31796e3697c0a200809d226c9 k__Bacteria p__Firmicutes c__Clostridia o__Peptococcales f__Peptococcaceae g__Peptococcus s__Peptococcus_simiae
0669483488e6bc7cc96908ebdfe1f160 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcales-Tissierellales g__Parvimonas NA
e93b313352019b8113e7fc66bf757917 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcales-Tissierellales g__Parvimonas NA
08ea1d1191e634047bd4f5d67c3e8b03 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcales-Tissierellales g__Parvimonas NA
40aec1a954f00728a41adf465bfd8ae1 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcales-Tissierellales g__Parvimonas NA
98bcf713cdab713b589f72f2ebcef570 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcaceae g__Filifactor NA
e994ae5567f24a896b477a67916f82a7 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcaceae g__Filifactor NA
e335f74033bc634af43ee6baa84fa247 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcaceae g__Romboutsia NA
cc977711b62615f81f353a181ad959e1 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcaceae g__Intestinibacter NA
b25a309208292a220a84e34a9c8e9f70 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Anaerovoracaceae g__[Eubacterium]_brachy_group NA
5e6462a5cd16be9501cf2b4effe78a3d k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Anaerovoracaceae g__[Eubacterium]_nodatum_group NA
7fb08fa9b7b2eef6a3db57d0de769227 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcales-Tissierellales g__Peptoniphilus NA
0e4f01e8305f56d0abbe06fd075f657b k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcaceae g__Peptostreptococcaceae s__uncultured_Eubacteriaceae
bc8f4b20da6a7efbc4cb6ede37704096 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcaceae g__[Eubacterium]_yurii_group NA
742523a3a3ffee1ce7b6b8c568053736 k__Bacteria p__Firmicutes c__Clostridia o__Peptostreptococcales-Tissierellales f__Peptostreptococcaceae g__[Eubacterium]_yurii_group NA
2c73db9e85fe1ace4b0ed52547c25f7d k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae g__Clostridium_sensu_stricto_1 NA
9580aa8a52ec18a4e92e701cdb595faa k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae g__Clostridium_sensu_stricto_1 NA
bde6c86785d8adde4cd2c63c92fad3b1 k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae g__Candidatus_Arthromitus NA
03dc314a20a7b2ee0d90d01ffd242275 k__Bacteria p__Firmicutes c__Clostridia o__Clostridiales f__Clostridiaceae g__Candidatus_Arthromitus NA
3eb129ba3c12a44620647798dde41194 k__Bacteria p__Firmicutes c__Clostridia o__Clostridia_UCG-014 f__Clostridia_UCG-014 g__Clostridia_UCG-014 s__Clostridiales_bacterium
f22ee0a5903daca754fb643cd345024e k__Bacteria p__Firmicutes c__Clostridia o__Clostridia_UCG-014 f__Clostridia_UCG-014 g__Clostridia_UCG-014 NA
aefdd711d0f4fb8b0853c92d4aebcddd k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Ruminococcus NA
0717bc0df2712284d767eb9b61bcba12 k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Ruminococcus NA
b4d8163d0c946cd46dbd0503a132828b k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Paludicola NA
0d7495cda74fc025bac3da9a05aa1160 k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Subdoligranulum NA
4a20a5244ec9c4dfa60b32a5cb53f0e9 k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Faecalibacterium NA
28bc0918b96a35946dbce4765671f220 k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Faecalibacterium NA
59777186ad2e0947e97615b5d6225136 k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Faecalibacterium NA
f5f5e0da89730462abaf6301a9557193 k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Faecalibacterium NA
3f3053fe60809d04ee141e8ad986eea1 k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Ruminococcaceae g__Fournierella NA
f0e507b4232d78baef7da47adb64cd0f k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Butyricicoccaceae g__UCG-008 s__uncultured_bacterium
14fcc0fe267b554476817be95f34c8fc k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Butyricicoccaceae g__UCG-008 s__uncultured_bacterium
3e1088a9b0a946fd0ce8e3621fb33e85 k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Oscillospiraceae g__NK4A214_group NA
68d79c3035521e82b504b081a197d2ed k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Oscillospiraceae g__UCG-002 NA
aae4c4ed528ae16ec417df816699cfdb k__Bacteria p__Firmicutes c__Clostridia o__Oscillospirales f__Oscillospiraceae g__UCG-005 NA
65564efafb80060ef155c05105b8ed0b k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Defluviitaleaceae g__Defluviitaleaceae_UCG-011 NA
2e4f2b53b856c4def6d021d01f5abb70 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Dorea NA
d71feb1923fa288790187009e8efa6d3 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Blautia NA
00a96fbd0ac34bfd245f9c24f8737f7d k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Blautia NA
9977686c30343be88979f8874db4f5ee k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Blautia NA
c6c3ab4e828fb40d6e05967b7aac9338 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Blautia NA
f73bc660ad02cf25a2e30bead37e34fd k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Blautia NA
db7f42d2a4ded289e177bb4c00edff61 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Lachnospiraceae_NK4A136_group NA
2df371c65a7a3622b70415bd07c4081f k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Oribacterium NA
46251d23749949f510561ffb46810e72 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Oribacterium s__uncultured_bacterium
8b53c1e7c9d8c5c7f2478c690c456448 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Oribacterium NA
c05a9b572f318b0d5bed54862e21f4b5 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Lachnoanaerobaculum s__uncultured_Lachnospiraceae
a97ff4c1f17e5aeb43ae254f3eeaadc5 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Johnsonella s__uncultured_bacterium
111451892edcf1bab8a7eef279a48829 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Johnsonella s__uncultured_bacterium
d4c3fc22b3695b304dba9cb14e40871c k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Johnsonella s__Johnsonella_ignava
5715f067a454fd140c037672cdd136d4 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Johnsonella s__uncultured_bacterium
0facdd17bfc08b45b9e17f53466cf6d5 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Johnsonella s__Firmicutes_oral
61eb84d2c1b237d12e5820d0e8491d16 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Johnsonella s__Firmicutes_oral
893ab04b63ad54ae6f437b9eb337b34a k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Roseburia NA
bd5ef8f372e09bcf6ec35825be4f053c k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Coprococcus NA
34c655d69d8d97a4cb465b7ca9b6e4f4 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
8ddf72eaff96bbb6afd9af5190d41beb k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
6794caffaf6122c413a2996c8c76f92d k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
1130a5c382e6a46fb3da317221512084 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
df63dbbefa3fb2d76c7807e5600fa3a9 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
6b81b752be929fe8116057f314c04ebb k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
1a2ccf46173284f8faddf904d183a8f0 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
c252f2a8b75b40252a6c7b0f3738407b k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
427549812f9051f8f372ff62ea807e78 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__Anaerosporobacter s__Caecibacterium_sporoformans
43de2d22c3f82423071816f91be76df7 k__Bacteria p__Firmicutes c__Clostridia o__Lachnospirales f__Lachnospiraceae g__[Eubacterium]_hallii_group NA
a9b24370bdb02a8ee91855de7b8b2813 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Bifidobacteriales f__Bifidobacteriaceae g__Bifidobacterium NA
68b2f49cdf7c259310aad8a3d5a88521 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Bifidobacteriales f__Bifidobacteriaceae g__Alloscardovia NA
9463140c5447404906615edb03bca4c8 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Bifidobacteriales f__Bifidobacteriaceae g__Alloscardovia NA
d83f60183d81253a505beaeef3cd168f k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Micrococcaceae g__Rothia NA
0987e0bb2312b68231749472c20fc3e8 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Actinomycetales f__Actinomycetaceae g__Arcanobacterium NA
1902045fa7900495d421b8a8f308eb85 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Micrococcaceae g__Rothia NA
c6a2f591dadc98f64cee63b02fdbd7a6 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Micrococcaceae g__Rothia NA
2721fd42d5373667f111c60faaf21eac k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Micrococcaceae g__Rothia NA
24cc3e5ed7ac688aa9ba397a1c975eef k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Micrococcaceae g__Rothia NA
4f2e0db8ab996cf7529fe9d41f8cce7a k__Bacteria p__Actinobacteriota c__Actinobacteria o__Corynebacteriales f__Corynebacteriaceae g__Lawsonella NA
820f6693f569e339f183638cd73a7fe6 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Corynebacteriales f__Corynebacteriaceae g__Lawsonella NA
77a920bd965da12d31f93c1adf2c5ea1 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Corynebacteriales f__Corynebacteriaceae g__Corynebacterium s__Corynebacterium_matruchotii
455219eeb206cd432bf64f51159e0b4c k__Bacteria p__Actinobacteriota c__Actinobacteria o__Corynebacteriales f__Corynebacteriaceae g__Corynebacterium s__Corynebacterium_durum
aa9b3a1418d146c262ec63305292065a k__Bacteria p__Actinobacteriota c__Actinobacteria o__Corynebacteriales f__Corynebacteriaceae g__Corynebacterium NA
7d78ed99b08bd1723065fdd795d17e9c k__Bacteria p__Actinobacteriota c__Actinobacteria o__Corynebacteriales f__Corynebacteriaceae g__Corynebacterium NA
497a26126c9e726c768bdec79e8c4e9b k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Microbacteriaceae g__Curtobacterium NA
3cd9ce63f826137d18ca1a11155a21ad k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Microbacteriaceae g__Leifsonia NA
77385b25f24d23e87b64319c3bdc63ce k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Cellulomonadaceae g__Tropheryma s__uncultured_Tropheryma
d8cd6708752160e97ea91073d838a7a3 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Cellulomonadaceae g__Tropheryma s__uncultured_Tropheryma
113e6b62ab32f8b56572e4c4b9ab7a51 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Cellulomonadaceae g__Tropheryma s__uncultured_Tropheryma
d39a41028decdb96137579f346520e9d k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Cellulomonadaceae g__Tropheryma s__uncultured_Tropheryma
128e171e4b500bd005076b40f2baf55e k__Bacteria p__Actinobacteriota c__Actinobacteria o__Micrococcales f__Cellulomonadaceae g__Tropheryma s__uncultured_Tropheryma
df8456a1abbfb4c8a2c450b44378d4cb k__Bacteria p__Actinobacteriota c__Actinobacteria o__Actinomycetales f__Actinomycetaceae g__Actinomyces NA
75a3e20e916ee5ec7dceae34a1bc0209 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Actinomycetales f__Actinomycetaceae g__Actinomyces NA
0ed3a6836e138f14044f6950ad7280d2 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Actinomycetales f__Actinomycetaceae g__Actinomyces NA
971e23d78c4b1b44672665973cff6327 k__Bacteria p__Actinobacteriota c__Actinobacteria o__Actinomycetales f__Actinomycetaceae g__Varibaculum NA
86a086d2aedaf97453458f07c10e29ad k__Bacteria p__Actinobacteriota c__Actinobacteria o__Actinomycetales f__Actinomycetaceae g__Actinomycetaceae s__Actinomycetaceae_bacterium
40f08ff751166fd3cede946315c73f76 k__Bacteria p__Actinobacteriota c__Coriobacteriia o__Coriobacteriales f__uncultured g__uncultured s__uncultured_bacterium
97f9ce45bbf00eb0dc0db5b7e11e6aab k__Bacteria p__Actinobacteriota c__Coriobacteriia o__Coriobacteriales f__Atopobiaceae g__Atopobium NA
840d392f141c9aacf0a0728d9a8001be k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Selenomonadaceae g__Selenomonas NA
c7c3a99e738a8eb43e029959f2a9def9 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Selenomonadaceae g__Selenomonas NA
cb69064af2354add642bb1a01ed3cab4 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Selenomonadaceae g__Selenomonas NA
3756682a80bcc83817cb1b5c5366d144 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Selenomonadaceae g__Selenomonas NA
dcb780205dff9735d08f1a23c93470cf k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Selenomonadaceae g__Selenomonas s__Selenomonas_sputigena
94a302cc7a648f23c27353f085b24e06 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Selenomonadaceae g__Anaerovibrio NA
4389ca84941288b4c15ae6c6b8cb5313 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
843c1e156a6272162022b488a158df60 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
8e9f26df4f3f78c0492321dc7c6216ec k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
531712f52227b63c1021521ebd29c475 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
ea358b1ebdd7b754b4537189f97c220a k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
b022b5312f30be684bdd2cc66030dea5 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
76a2a89fb35336e7b117fc44ff915092 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
cd9401a6bce4a63af516d06d2a843f9d k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
68aed095c691f3c043b9f6fc89890a2d k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
9688f626baffe31c883bafae597fbdae k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Dialister NA
be22632d5e3f6175707a3213d7a90ad2 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Dialister NA
dbc4e481aa19da376e92bbe4d8ff42d3 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Dialister s__uncultured_bacterium
37fd93193e4e5ef521ca38dadafa3a5a k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
eae880eaa9c99650e399d9b4eb5dd3b0 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
0f08a8ba9e95c5cfed91d475028e2855 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
a6797af6081420fae8c781cfde495897 k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
923f521b9cf313f1f95c9367e09bbc1c k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
e793490ff3ebd72c4457a0e1f427eb5c k__Bacteria p__Firmicutes c__Negativicutes o__Veillonellales-Selenomonadales f__Veillonellaceae g__Veillonella NA
e4916954a7b156cbb911bb3c0af10d53 k__Bacteria p__Firmicutes c__Bacilli o__Erysipelotrichales f__uncultured g__uncultured s__uncultured_bacterium
b6254c4d9f9e5f89f3060f6805754c17 k__Bacteria p__Firmicutes c__Bacilli o__Erysipelotrichales f__uncultured g__uncultured s__uncultured_bacterium
a0871318729fc2d9f6ae1be8b45fa952 k__Bacteria p__Firmicutes c__Bacilli o__Erysipelotrichales f__Erysipelatoclostridiaceae g__Erysipelatoclostridium NA
ee864e547658d4889c993de87b1a349a k__Bacteria p__Firmicutes c__Bacilli o__Erysipelotrichales f__Erysipelatoclostridiaceae g__Erysipelotrichaceae_UCG-003 NA
aafb6ca6537c21f170ece1de474769ab k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Staphylococcaceae g__Staphylococcus NA
65d43491988bfe557da4d86a5ba25dae k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Staphylococcaceae g__Staphylococcus NA
8339a12705dd373194b95ba731c47af8 k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Staphylococcaceae g__Staphylococcus NA
f849febf52b4ae538554b6e65d7fc47c k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Staphylococcaceae g__Staphylococcus NA
126e0259d6df65a50a9d14149a30f477 k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Staphylococcaceae g__Staphylococcus NA
9e1b1776cd5973bca311645149a85b87 k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Staphylococcaceae g__Staphylococcus NA
5b30ecd29701a77b385770d15cab1704 k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Gemellaceae g__Gemella NA
c52d6c2088db628632b7a14c0e5d752d k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Gemellaceae g__Gemella NA
d23346fdcf9ebe8e57dbd511acaee05d k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Gemellaceae g__Gemella NA
26633175b4d2a2f5feb6ebb9b87321f3 k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Gemellaceae g__Gemella NA
85c44c83eddc5d3028261a1000b7d0e1 k__Bacteria p__Firmicutes c__Bacilli o__Staphylococcales f__Gemellaceae g__Gemella NA
b03d2e5ac94c7a0d115e5c542e9315e8 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Carnobacteriaceae g__Dolosigranulum NA
50fd1c9614c2cdbad76a0cee521fb46b k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Catellicoccaceae g__Catellicoccus NA
65641452be75528754b5ae258ba661c1 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Aerococcaceae g__Aerococcus NA
29fbc7e5021229480248fa7466a499a2 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Aerococcaceae g__Abiotrophia s__uncultured_bacterium
05bd1d289c2bccf4501b2f90976e531b k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Enterococcaceae g__Enterococcus NA
8e53132374397c334ee9f914a57b3edd k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Vagococcaceae g__Vagococcus NA
95fdd816723ca482a5caba10bea171c8 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus NA
45d4fe3f6c01f77c2dfc11dd91d3359a k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus NA
d6a526b572996ed919a3e009473bc860 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus NA
5d1665b0e47078aaf2b5fe621d09976d k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus NA
0df6c802966e8670279671824da4f10a k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Lactobacillus NA
2bd9309f2f97cae51d18d06ea1ca519a k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Carnobacteriaceae g__Granulicatella NA
9908fffab7ed4f3bec44cda2f5084d49 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Enterococcaceae g__Enterococcus NA
9e75d15ba3717ca20d8aa45e3c4a6bab k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Leuconostocaceae g__Leuconostoc NA
06f825b512d903b9230e1a55d87359ee k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
55b7b7586b6252b87981f170d6ac11c5 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
b4fd80c189d9f173e66fcea1caf8111e k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
b2001ab4daf61a63d9d2f980bdf2c3dd k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
108bd50f45057fda4dd3f24f9fae46fa k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
2cc07609ab15894baed9fe4c508dd12d k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
197157305cb21721cdc0e4aadc9460e2 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
aa231e014d821dc7845da2972df0a230 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
41c50945f46692bc4a1552bfcb20f397 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
94b8f960aa3adb2f6f23adf0c26e6058 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
5179a2d863129db0480a654447b8b62b k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
edc9e5c16e40aff1eadce6597940f08f k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
492d3ad15aeb63c93e1c94ed7853f5af k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
a966196c8aff0e8664f261016da82614 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
027cc4e57f832f6792df8fc21ffd9bbb k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
4ba7a78de011ba7897f307038d1e1bab k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
1b51357852b0b814b4d9918c6f0ab762 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
39414efe8e809129734b7c33d06c42b7 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
9fec7bdd6bd88e710bd69b15692e54a0 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
860d345a8b6afb765a0e588654f08c1d k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
e7cfd084265c4df4856ca07b1c9b24ee k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus s__Streptococcus_mutans
d58e3747278152d2506e3587184efd10 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Streptococcus NA
d114fb4c335125128be28401522dd41a k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Lactococcus NA
H.pylori Metadata
H.pylori Metadata
SampleID Treatment site Site_status sex log10_cfu.gm IL8_Lavage IL8_Plasma
LMiller_00458.BAL LMiller_00458.BAL H.pylori_(-) BAL H.pylori_(-)_BAL Female 0.00 NA 463.376
LMiller_00458.Swab LMiller_00458.Swab H.pylori_(-) Swab H.pylori_(-)_Swab Female 0.00 NA 463.376
LMiller_00459.BAL LMiller_00459.BAL H.pylori_(-) BAL H.pylori_(-)_BAL Female 0.00 NA 258.416
LMiller_00459.Swab LMiller_00459.Swab H.pylori_(-) Swab H.pylori_(-)_Swab Female 0.00 NA 258.416
LMiller_00461.BAL LMiller_00461.BAL H.pylori_(+) BAL H.pylori_(+)_BAL Female 7.66 NA 704.550
LMiller_00461.Swab LMiller_00461.Swab H.pylori_(+) Swab H.pylori_(+)_Swab Female 7.66 NA 704.550
LMiller_00462.BAL LMiller_00462.BAL H.pylori_(-) BAL H.pylori_(-)_BAL Female 0.00 19.104 1075.626
LMiller_00462.Swab LMiller_00462.Swab H.pylori_(-) Swab H.pylori_(-)_Swab Female 0.00 19.104 1075.626
LMiller_00463.BAL LMiller_00463.BAL H.pylori_(-) BAL H.pylori_(-)_BAL Female 0.00 11.590 423.590
LMiller_00466.BAL LMiller_00466.BAL H.pylori_(+) BAL H.pylori_(+)_BAL Female 3.81 11.201 642.148
LMiller_00466.Swab LMiller_00466.Swab H.pylori_(+) Swab H.pylori_(+)_Swab Female 3.81 11.201 642.148
LMiller_00467.BAL LMiller_00467.BAL H.pylori_(+) BAL H.pylori_(+)_BAL Female 6.09 15.511 425.782
LMiller_00467.Swab LMiller_00467.Swab H.pylori_(+) Swab H.pylori_(+)_Swab Female 6.09 15.511 425.782
LMiller_00468.BAL LMiller_00468.BAL H.pylori_(-) BAL H.pylori_(-)_BAL Female 0.00 15.511 660.911
LMiller_00468.Swab LMiller_00468.Swab H.pylori_(-) Swab H.pylori_(-)_Swab Female 0.00 15.511 660.911
LMiller_00469.BAL LMiller_00469.BAL H.pylori_(+) BAL H.pylori_(+)_BAL Female 6.38 NA 1279.789
LMiller_00469.Swab LMiller_00469.Swab H.pylori_(+) Swab H.pylori_(+)_Swab Female 6.38 NA 1279.789
LMiller_00473.BAL LMiller_00473.BAL H.pylori_(-) BAL H.pylori_(-)_BAL Female 0.00 20.100 608.508
LMiller_00473.Swab LMiller_00473.Swab H.pylori_(-) Swab H.pylori_(-)_Swab Female 0.00 20.100 608.508
LMiller_00474.BAL LMiller_00474.BAL H.pylori_(-) BAL H.pylori_(-)_BAL Female 0.00 44.699 443.989
LMiller_00476.BAL LMiller_00476.BAL H.pylori_(+) BAL H.pylori_(+)_BAL Female 5.48 NA 476.431
LMiller_00476.Swab LMiller_00476.Swab H.pylori_(+) Swab H.pylori_(+)_Swab Female 5.48 NA 476.431
LMiller_00477.BAL LMiller_00477.BAL H.pylori_(+) BAL H.pylori_(+)_BAL Female 5.81 NA 715.056
LMiller_00477.Swab LMiller_00477.Swab H.pylori_(+) Swab H.pylori_(+)_Swab Female 5.81 NA 715.056
LMiller_00481.BAL LMiller_00481.BAL H.pylori_(-) BAL H.pylori_(-)_BAL Female 0.00 17.622 NA
LMiller_00481.Swab LMiller_00481.Swab H.pylori_(-) Swab H.pylori_(-)_Swab Female 0.00 17.622 NA

Odds ratios of variables based on H. pylori status

OR 2.5 % 97.5 % p
(Intercept) 0.018 0.000 110.146 0.410
infant_weight_kg 0.243 0.000 7254.525 0.786
age_days_infants 1.042 0.955 1.177 0.413
il_bal_pg.ml 0.993 0.852 1.158 0.921
il_plasma_pg.ml 0.996 0.985 1.001 0.271

Sequenced animal IL8 to H. pylori load correlations

This plot only includes animals that had material sequenced and not all 25 animals from the study

This plot only includes animals that had material sequenced and not all 25 animals from the study

This plot only includes animals that had material sequenced and not all 25 animals from the study

This plot only includes animals that had material sequenced and not all 25 animals from the study

## [1] "microtable" "R6"

Overlapping Taxa Between Sites and H. pylori Status

Lavage overlapping taxa

## [1] "microtable" "R6"

Buccal overlapping taxa

## [1] "microtable" "R6"

Lefse analysis and differential abundance for both sites

## [1] "microtable" "R6"

Lefse table

Lefse taxa from bronchoalveolar lavage and oral swab
Lefse taxa from bronchoalveolar lavage and oral swab
Taxa Group pvalue LDA
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria H.pylori_(-)_Swab 6e-04 5.3955
k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae H.pylori_(+)_BAL 1e-04 5.3353
k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter H.pylori_(+)_BAL 1e-04 5.3353
k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_canadensis k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_canadensis H.pylori_(+)_BAL 1e-04 5.3353
k__Bacteria|p__Campilobacterota k__Bacteria|p__Campilobacterota H.pylori_(+)_BAL 1e-04 5.3224

Relative abundance of differential taxa

Lefse and differential abundance for bronchoalveolar lavage

## [1] "microtable" "R6"

Lefse table

Lefse Taxa from Bronchoalveolar Lavage
Lefse Taxa from Bronchoalveolar Lavage
Taxa Group pvalue LDA
k__Bacteria|p__Proteobacteria k__Bacteria|p__Proteobacteria H.pylori_(-)_BAL 0.0001 4.9455
k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria H.pylori_(-)_BAL 0.0001 4.9325
k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales H.pylori_(-)_BAL 0.0001 4.9325
k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae H.pylori_(-)_BAL 0.0001 4.9325
k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae|g__Methylobacterium-Methylorubrum k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae|g__Methylobacterium-Methylorubrum H.pylori_(-)_BAL 0.0001 4.9325
k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae|g__Methylobacterium-Methylorubrum|s__Methylobacterium_aerolatum k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae|g__Methylobacterium-Methylorubrum|s__Methylobacterium_aerolatum H.pylori_(-)_BAL 0.0001 4.9046
k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_canadensis k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_canadensis H.pylori_(+)_BAL 0.0001 4.8441
k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae H.pylori_(+)_BAL 0.0001 4.8273
k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter H.pylori_(+)_BAL 0.0001 4.8273
k__Bacteria|p__Campilobacterota k__Bacteria|p__Campilobacterota H.pylori_(+)_BAL 0.0001 4.8207
k__Bacteria|p__Campilobacterota|c__Campylobacteria k__Bacteria|p__Campilobacterota|c__Campylobacteria H.pylori_(+)_BAL 0.0001 4.8207
k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales H.pylori_(+)_BAL 0.0001 4.8207
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales H.pylori_(-)_BAL 0.0001 4.4707
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae H.pylori_(-)_BAL 0.0001 4.4513
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae|g__Flavobacterium k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae|g__Flavobacterium H.pylori_(-)_BAL 0.0001 4.4513
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae|g__Flavobacterium|s__Flavobacterium_ceti k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae|g__Flavobacterium|s__Flavobacterium_ceti H.pylori_(-)_BAL 0.0001 4.4513
k__Bacteria|p__Bacteroidota k__Bacteria|p__Bacteroidota H.pylori_(-)_BAL 0.0001 4.3949
k__Bacteria|p__Bacteroidota|c__Bacteroidia k__Bacteria|p__Bacteroidota|c__Bacteroidia H.pylori_(-)_BAL 0.0001 4.3949
k__Bacteria|p__Firmicutes k__Bacteria|p__Firmicutes H.pylori_(+)_BAL 0.0092 4.1119
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales H.pylori_(-)_BAL 0.0092 4.0882
k__Bacteria|p__Firmicutes|c__Clostridia k__Bacteria|p__Firmicutes|c__Clostridia H.pylori_(+)_BAL 0.0092 3.7418
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales H.pylori_(-)_BAL 0.0059 3.6174
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales|f__Sphingobacteriaceae k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales|f__Sphingobacteriaceae H.pylori_(-)_BAL 0.0059 3.6174
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium H.pylori_(-)_BAL 0.0059 3.6174
k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium|s__Sphingobacterium_spiritivorum k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium|s__Sphingobacterium_spiritivorum H.pylori_(-)_BAL 0.0059 3.6174

Relative abundance of differential taxa

Lefse and differential abundance for oral swabs

## [1] "microtable" "R6"

Lefse table

Lefse Taxa from oral swabs
Lefse taxa from oral swabs
Taxa Group pvalue LDA
k__Bacteria|p__Proteobacteria k__Bacteria|p__Proteobacteria H.pylori_(-)_Swab 0.0005 5.0119
k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae H.pylori_(+)_Swab 0.0039 5.0018
k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia H.pylori_(+)_Swab 0.0039 5.0018
k__Bacteria|p__Fusobacteriota k__Bacteria|p__Fusobacteriota H.pylori_(+)_Swab 0.0039 5.0008
k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales H.pylori_(+)_Swab 0.0039 5.0008
k__Bacteria|p__Fusobacteriota|c__Fusobacteriia k__Bacteria|p__Fusobacteriota|c__Fusobacteriia H.pylori_(+)_Swab 0.0039 5.0008
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria H.pylori_(-)_Swab 0.0039 4.9702
k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_hongkongensis k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_hongkongensis H.pylori_(+)_Swab 0.0059 4.9669
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales H.pylori_(-)_Swab 0.0039 4.7096
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae H.pylori_(-)_Swab 0.0039 4.7096
k__Bacteria|p__Patescibacteria k__Bacteria|p__Patescibacteria H.pylori_(-)_Swab 0.0092 4.5155
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter H.pylori_(+)_Swab 0.0039 4.4726
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_actinomycetemcomitans k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_actinomycetemcomitans H.pylori_(+)_Swab 0.0039 4.4726

Relative abundance of differential taxa

Beta diversity

Unweighted unifrac PCoA plots

##       PC1       PC2        PC3        PC4        PC5        PC6        PC7
## 1 0.38311 0.1122317 0.08255574 0.05624649 0.04518453 0.04178459 0.03697168
##          PC8       PC9      PC10       PC11      PC12       PC13       PC14
## 1 0.03441675 0.0305229 0.0292508 0.02395872 0.0227312 0.01881898 0.01538496
##        PC15       PC16       PC17        PC18        PC19        PC20
## 1 0.0140825 0.01226748 0.01155323 0.008776171 0.007488221 0.004824027
##          PC21        PC22        PC23 PC24 PC25 PC26
## 1 0.003528799 0.002630896 0.001679594    0    0    0

Bray-Curtis

Alpha Diversity

Shannon index by site and H. pylori status

Shannon index by site only

Additional alpha diversity measures

All alpha diversity measurees
Apha Diversity Assessement
Groups Measure Test method p.value Significance
H.pylori_(-)BAL vs H.pylori(-)_Swab Observed KW 0.220
H.pylori_(-)BAL vs H.pylori(+)_BAL Observed KW 0.651
H.pylori_(-)BAL vs H.pylori(+)_Swab Observed KW 0.081
H.pylori_(-)Swab vs H.pylori(+)_BAL Observed KW 0.262
H.pylori_(-)Swab vs H.pylori(+)_Swab Observed KW 0.520
H.pylori_(+)BAL vs H.pylori(+)_Swab Observed KW 0.109
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab Observed KW 0.202
H.pylori_(-)BAL vs H.pylori(-)_Swab Chao1 KW 0.220
H.pylori_(-)BAL vs H.pylori(+)_BAL Chao1 KW 0.651
H.pylori_(-)BAL vs H.pylori(+)_Swab Chao1 KW 0.081
H.pylori_(-)Swab vs H.pylori(+)_BAL Chao1 KW 0.262
H.pylori_(-)Swab vs H.pylori(+)_Swab Chao1 KW 0.520
H.pylori_(+)BAL vs H.pylori(+)_Swab Chao1 KW 0.109
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab Chao1 KW 0.202
H.pylori_(-)BAL vs H.pylori(-)_Swab ACE KW 0.220
H.pylori_(-)BAL vs H.pylori(+)_BAL ACE KW 0.651
H.pylori_(-)BAL vs H.pylori(+)_Swab ACE KW 0.081
H.pylori_(-)Swab vs H.pylori(+)_BAL ACE KW 0.262
H.pylori_(-)Swab vs H.pylori(+)_Swab ACE KW 0.520
H.pylori_(+)BAL vs H.pylori(+)_Swab ACE KW 0.109
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab ACE KW 0.202
H.pylori_(-)BAL vs H.pylori(-)_Swab Shannon KW 0.439
H.pylori_(-)BAL vs H.pylori(+)_BAL Shannon KW 1.000
H.pylori_(-)BAL vs H.pylori(+)_Swab Shannon KW 0.796
H.pylori_(-)Swab vs H.pylori(+)_BAL Shannon KW 0.109
H.pylori_(-)Swab vs H.pylori(+)_Swab Shannon KW 0.337
H.pylori_(+)BAL vs H.pylori(+)_Swab Shannon KW 0.423
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab Shannon KW 0.540
H.pylori_(-)BAL vs H.pylori(-)_Swab Simpson KW 0.519
H.pylori_(-)BAL vs H.pylori(+)_BAL Simpson KW 0.699
H.pylori_(-)BAL vs H.pylori(+)_Swab Simpson KW 0.699
H.pylori_(-)Swab vs H.pylori(+)_BAL Simpson KW 0.109
H.pylori_(-)Swab vs H.pylori(+)_Swab Simpson KW 0.423
H.pylori_(+)BAL vs H.pylori(+)_Swab Simpson KW 0.262
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab Simpson KW 0.493
H.pylori_(-)BAL vs H.pylori(-)_Swab InvSimpson KW 0.519
H.pylori_(-)BAL vs H.pylori(+)_BAL InvSimpson KW 0.699
H.pylori_(-)BAL vs H.pylori(+)_Swab InvSimpson KW 0.699
H.pylori_(-)Swab vs H.pylori(+)_BAL InvSimpson KW 0.109
H.pylori_(-)Swab vs H.pylori(+)_Swab InvSimpson KW 0.423
H.pylori_(+)BAL vs H.pylori(+)_Swab InvSimpson KW 0.262
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab InvSimpson KW 0.493
H.pylori_(-)BAL vs H.pylori(-)_Swab Fisher KW 0.606
H.pylori_(-)BAL vs H.pylori(+)_BAL Fisher KW 0.699
H.pylori_(-)BAL vs H.pylori(+)_Swab Fisher KW 0.796
H.pylori_(-)Swab vs H.pylori(+)_BAL Fisher KW 0.631
H.pylori_(-)Swab vs H.pylori(+)_Swab Fisher KW 0.631
H.pylori_(+)BAL vs H.pylori(+)_Swab Fisher KW 1.000
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab Fisher KW 0.927
H.pylori_(-)BAL vs H.pylori(-)_Swab Coverage KW NaN NA
H.pylori_(-)BAL vs H.pylori(+)_BAL Coverage KW NaN NA
H.pylori_(-)BAL vs H.pylori(+)_Swab Coverage KW NaN NA
H.pylori_(-)Swab vs H.pylori(+)_BAL Coverage KW NaN NA
H.pylori_(-)Swab vs H.pylori(+)_Swab Coverage KW NaN NA
H.pylori_(+)BAL vs H.pylori(+)_Swab Coverage KW NaN NA
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab Coverage KW NaN NA
H.pylori_(-)BAL vs H.pylori(-)_Swab PD KW 0.366
H.pylori_(-)BAL vs H.pylori(+)_BAL PD KW 0.699
H.pylori_(-)BAL vs H.pylori(+)_Swab PD KW 0.439
H.pylori_(-)Swab vs H.pylori(+)_BAL PD KW 0.631
H.pylori_(-)Swab vs H.pylori(+)_Swab PD KW 0.749
H.pylori_(+)BAL vs H.pylori(+)_Swab PD KW 0.631
H.pylori_(-)BAL vs H.pylori(-)Swab vs H.pylori(+)BAL vs H.pylori(+)_Swab PD KW 0.777

Helicobacter positive respiratory samples

Helicobacter positive samples separated by site

Helicobacter positive samples separated by animal

Taxa barplots

Microbiota Composition at Phylum level.

Microbiota Composition at Phylum level.

Microbiota Composition at Phylum level.

Microbiota Composition at Phylum level.

Average Relative Abundance
Phylum
Taxonomy Sample Average Percent Abundance
Acidobacteriota H.pylori_(+)_BAL 0.1%
Actinobacteriota H.pylori_(-)_BAL 3.1%
Actinobacteriota H.pylori_(+)_BAL 1.8%
Actinobacteriota H.pylori_(+)_Swab 0.1%
Actinobacteriota H.pylori_(-)_Swab 0%
Bacteroidota H.pylori_(+)_BAL 21.7%
Bacteroidota H.pylori_(+)_Swab 17.4%
Bacteroidota H.pylori_(-)_BAL 14.9%
Bacteroidota H.pylori_(-)_Swab 10.8%
Campilobacterota H.pylori_(+)_BAL 12.9%
Campilobacterota H.pylori_(-)_BAL 7.7%
Campilobacterota H.pylori_(-)_Swab 0%
Deinococcota H.pylori_(+)_BAL 0.6%
Desulfobacterota H.pylori_(-)_BAL 0.1%
Firmicutes H.pylori_(-)_BAL 31.1%
Firmicutes H.pylori_(+)_Swab 21.7%
Firmicutes H.pylori_(-)_Swab 21%
Firmicutes H.pylori_(+)_BAL 15.2%
Fusobacteriota H.pylori_(+)_Swab 9.8%
Fusobacteriota H.pylori_(+)_BAL 8.6%
Fusobacteriota H.pylori_(-)_BAL 7.8%
Fusobacteriota H.pylori_(-)_Swab 7%
Latescibacterota H.pylori_(-)_BAL 0%
Patescibacteria H.pylori_(-)_Swab 0.4%
Patescibacteria H.pylori_(+)_Swab 0.3%
Patescibacteria H.pylori_(+)_BAL 0.3%
Patescibacteria H.pylori_(-)_BAL 0%
Proteobacteria H.pylori_(-)_Swab 60.7%
Proteobacteria H.pylori_(+)_Swab 50.7%
Proteobacteria H.pylori_(+)_BAL 38.9%
Proteobacteria H.pylori_(-)_BAL 34.5%
Spirochaetota H.pylori_(-)_BAL 0.7%
Microbiota Composition at Class level.

Microbiota Composition at Class level.

Microbiota Composition at Class level.

Microbiota Composition at Class level.

Average Relative Abundance
Class
Taxonomy Sample Average Percent Abundance
Actinobacteria H.pylori_(-)_BAL 3.1%
Actinobacteria H.pylori_(+)_BAL 1.7%
Alphaproteobacteria H.pylori_(+)_BAL 14.7%
Alphaproteobacteria H.pylori_(-)_BAL 10.7%
Bacilli H.pylori_(-)_BAL 26%
Bacilli H.pylori_(-)_Swab 14.9%
Bacilli H.pylori_(+)_Swab 14.2%
Bacilli H.pylori_(+)_BAL 9.6%
Bacteroidia H.pylori_(+)_BAL 21.7%
Bacteroidia H.pylori_(+)_Swab 17.4%
Bacteroidia H.pylori_(-)_BAL 14.9%
Bacteroidia H.pylori_(-)_Swab 10.8%
Campylobacteria H.pylori_(+)_BAL 12.9%
Campylobacteria H.pylori_(-)_BAL 7.7%
Clostridia H.pylori_(-)_BAL 2.7%
Clostridia H.pylori_(+)_BAL 1.5%
Clostridia H.pylori_(+)_Swab 0.4%
Clostridia H.pylori_(-)_Swab 0.4%
Deinococci H.pylori_(+)_BAL 0.6%
Fusobacteriia H.pylori_(+)_Swab 9.8%
Fusobacteriia H.pylori_(+)_BAL 8.6%
Fusobacteriia H.pylori_(-)_BAL 7.8%
Fusobacteriia H.pylori_(-)_Swab 7%
Gammaproteobacteria H.pylori_(-)_Swab 60.7%
Gammaproteobacteria H.pylori_(+)_Swab 50.7%
Gammaproteobacteria H.pylori_(+)_BAL 24.3%
Gammaproteobacteria H.pylori_(-)_BAL 23.8%
Negativicutes H.pylori_(+)_Swab 7.1%
Negativicutes H.pylori_(-)_Swab 5.8%
Negativicutes H.pylori_(+)_BAL 4.1%
Negativicutes H.pylori_(-)_BAL 2.4%
Spirochaetia H.pylori_(-)_BAL 0.7%
Microbiota Composition at Order level.

Microbiota Composition at Order level.

Microbiota Composition at Order level.

Microbiota Composition at Order level.

Average Relative Abundance
Order
Taxonomy Sample Average Percent Abundance
Bacteroidales H.pylori_(+)_Swab 14.1%
Bacteroidales H.pylori_(+)_BAL 9.4%
Bacteroidales H.pylori_(-)_Swab 9.3%
Bacteroidales H.pylori_(-)_BAL 5.8%
Burkholderiales H.pylori_(+)_BAL 6.8%
Campylobacterales H.pylori_(+)_BAL 12.9%
Campylobacterales H.pylori_(-)_BAL 7.7%
Flavobacteriales H.pylori_(+)_BAL 11.7%
Flavobacteriales H.pylori_(-)_BAL 8.4%
Fusobacteriales H.pylori_(+)_Swab 9.8%
Fusobacteriales H.pylori_(+)_BAL 8.6%
Fusobacteriales H.pylori_(-)_BAL 7.8%
Fusobacteriales H.pylori_(-)_Swab 7%
Lactobacillales H.pylori_(-)_BAL 15.7%
Lactobacillales H.pylori_(+)_Swab 12.2%
Lactobacillales H.pylori_(-)_Swab 12%
Lactobacillales H.pylori_(+)_BAL 6%
Pasteurellales H.pylori_(-)_Swab 52.3%
Pasteurellales H.pylori_(+)_Swab 41%
Pasteurellales H.pylori_(+)_BAL 12%
Pasteurellales H.pylori_(-)_BAL 12%
Pseudomonadales H.pylori_(-)_BAL 10.8%
Pseudomonadales H.pylori_(-)_Swab 6.4%
Pseudomonadales H.pylori_(+)_Swab 5.9%
Pseudomonadales H.pylori_(+)_BAL 4.1%
Rhizobiales H.pylori_(-)_BAL 9.6%
Rhizobiales H.pylori_(+)_BAL 8.3%
Sphingomonadales H.pylori_(+)_BAL 5.8%
Staphylococcales H.pylori_(-)_BAL 10.1%
Veillonellales-Selenomonadales H.pylori_(+)_Swab 7.1%
Veillonellales-Selenomonadales H.pylori_(-)_Swab 5.8%
Veillonellales-Selenomonadales H.pylori_(+)_BAL 4.1%
Microbiota Composition at Family level.

Microbiota Composition at Family level.

Microbiota Composition at Family level.

Microbiota Composition at Family level.

Average Relative Abundance
Family
Taxonomy Sample Average Percent Abundance
Beijerinckiaceae H.pylori_(-)_BAL 9.5%
Beijerinckiaceae H.pylori_(+)_BAL 8.1%
Campylobacteraceae H.pylori_(+)_BAL 12.9%
Campylobacteraceae H.pylori_(-)_BAL 7.7%
Flavobacteriaceae H.pylori_(+)_BAL 11.5%
Flavobacteriaceae H.pylori_(-)_BAL 8.3%
Fusobacteriaceae H.pylori_(+)_BAL 8.5%
Fusobacteriaceae H.pylori_(+)_Swab 8.2%
Fusobacteriaceae H.pylori_(-)_BAL 7.4%
Fusobacteriaceae H.pylori_(-)_Swab 6.6%
Moraxellaceae H.pylori_(-)_BAL 10.1%
Moraxellaceae H.pylori_(-)_Swab 6.4%
Moraxellaceae H.pylori_(+)_Swab 5.9%
Oxalobacteraceae H.pylori_(+)_BAL 5%
Pasteurellaceae H.pylori_(-)_Swab 52.3%
Pasteurellaceae H.pylori_(+)_Swab 41%
Pasteurellaceae H.pylori_(+)_BAL 12%
Pasteurellaceae H.pylori_(-)_BAL 12%
Porphyromonadaceae H.pylori_(+)_Swab 10.5%
Porphyromonadaceae H.pylori_(-)_Swab 5.9%
Porphyromonadaceae H.pylori_(+)_BAL 4.4%
Prevotellaceae H.pylori_(+)_BAL 4.3%
Prevotellaceae H.pylori_(-)_BAL 4.1%
Sphingomonadaceae H.pylori_(+)_BAL 5.8%
Staphylococcaceae H.pylori_(-)_BAL 8.4%
Streptococcaceae H.pylori_(-)_BAL 14.2%
Streptococcaceae H.pylori_(+)_Swab 12.2%
Streptococcaceae H.pylori_(-)_Swab 12%
Streptococcaceae H.pylori_(+)_BAL 4.9%
Veillonellaceae H.pylori_(+)_Swab 7%
Veillonellaceae H.pylori_(-)_Swab 5.8%
Veillonellaceae H.pylori_(+)_BAL 4%
Microbiota Composition at Genus level.

Microbiota Composition at Genus level.

Microbiota Composition at Genus level.

Microbiota Composition at Genus level.

Average Relative Abundance
Genus
Taxonomy Sample Average Percent Abundance
Acinetobacter H.pylori_(-)_BAL 10.1%
Actinobacillus H.pylori_(-)_Swab 33.1%
Actinobacillus H.pylori_(+)_Swab 28.1%
Actinobacillus H.pylori_(-)_BAL 6.6%
Actinobacillus H.pylori_(+)_BAL 5.9%
Campylobacter H.pylori_(+)_BAL 12.9%
Campylobacter H.pylori_(-)_BAL 7.7%
Flavobacterium H.pylori_(+)_BAL 11.5%
Flavobacterium H.pylori_(-)_BAL 8.3%
Fusobacterium H.pylori_(+)_BAL 8.5%
Fusobacterium H.pylori_(+)_Swab 8.2%
Fusobacterium H.pylori_(-)_BAL 7.4%
Fusobacterium H.pylori_(-)_Swab 6.6%
Massilia H.pylori_(+)_BAL 4.9%
Methylobacterium-Methylorubrum H.pylori_(-)_BAL 9.5%
Methylobacterium-Methylorubrum H.pylori_(+)_BAL 8.1%
Moraxella H.pylori_(-)_Swab 6.4%
Moraxella H.pylori_(+)_Swab 5.9%
Porphyromonas H.pylori_(+)_Swab 10.5%
Porphyromonas H.pylori_(-)_Swab 5.9%
Rodentibacter H.pylori_(-)_Swab 18.9%
Rodentibacter H.pylori_(+)_Swab 12.1%
Rodentibacter H.pylori_(-)_BAL 4.9%
Rodentibacter H.pylori_(+)_BAL 4.7%
Sphingomonas H.pylori_(+)_BAL 5.4%
Staphylococcus H.pylori_(-)_BAL 8.4%
Streptococcus H.pylori_(-)_BAL 14.2%
Streptococcus H.pylori_(+)_Swab 12.2%
Streptococcus H.pylori_(-)_Swab 12%
Streptococcus H.pylori_(+)_BAL 4.9%
Veillonella H.pylori_(+)_Swab 7%
Veillonella H.pylori_(-)_Swab 5.8%

Genera correlation with Il8 concentration (Serum and BAL)

## [1] "microtable" "R6"
IL8 and lavage genus abundance Spearman correlations separated by H. pylori status

IL8 and lavage genus abundance Spearman correlations separated by H. pylori status

IL8 and lavage genus abundance Spearman correlations independent of H. pylori status

IL8 and lavage genus abundance Spearman correlations independent of H. pylori status

Independent of H. pylori status
Lavage IL8 spearman
Type Taxa Env Correlation Pvalue AdjPvalue Significance
V1 BAL k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Stenotrophomonas IL8_Lavage 0.8766 0.0043 0.0428
V2 BAL k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc IL8_Lavage -0.0706 0.8681 0.9209
V3 BAL k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Brevundimonas IL8_Lavage 0.7154 0.0460 0.1840
V4 BAL k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus IL8_Lavage -0.1212 0.7749 0.9209
V5 BAL k__Bacteria|p__Firmicutes|c__Bacilli|o__Staphylococcales|f__Staphylococcaceae|g__Staphylococcus IL8_Lavage 0.9323 0.0007 0.0147
V6 BAL k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas IL8_Lavage -0.0991 0.8155 0.9209
V7 BAL k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium IL8_Lavage -0.1952 0.6432 0.9209
V8 BAL k__Bacteria|p__Campilobacterota|c__Campylobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter IL8_Lavage -0.0434 0.9186 0.9209
V9 BAL k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Rodentibacter IL8_Lavage -0.2237 0.5943 0.9209
V10 BAL k__Bacteria|p__Actinobacteriota|c__Actinobacteria|o__Micrococcales|f__Micrococcaceae|g__Rothia IL8_Lavage -0.1758 0.6771 0.9209
V11 BAL k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae|g__Flavobacterium IL8_Lavage 0.7803 0.0223 0.1490
V12 BAL k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae|g__Methylobacterium-Methylorubrum IL8_Lavage 0.7498 0.0322 0.1609
V13 BAL k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales-Selenomonadales|f__Veillonellaceae|g__Veillonella IL8_Lavage -0.2543 0.5433 0.9209
V14 BAL k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas IL8_Lavage -0.3268 0.4295 0.9209
V15 BAL k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Actinobacillus IL8_Lavage -0.2950 0.4782 0.9209
V16 BAL k__Bacteria|p__Firmicutes|c__Bacilli|o__Staphylococcales|f__Gemellaceae|g__Gemella IL8_Lavage -0.0681 0.8726 0.9209
V17 BAL k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella IL8_Lavage -0.0422 0.9209 0.9209
V18 BAL k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium IL8_Lavage -0.2547 0.5428 0.9209
V19 BAL k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus IL8_Lavage -0.3512 0.3936 0.9209
V20 BAL k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Sphingomonas IL8_Lavage -0.1600 0.7051 0.9209
IL8 and lavage alpha diversity Spearman correlations inpendent of H. pylori status.

IL8 and lavage alpha diversity Spearman correlations inpendent of H. pylori status.

Independent of H. pylori status
Lavage Alpha Diversity
Type Taxa Env Correlation Pvalue AdjPvalue Significance
V1 All Observed IL8_Lavage -0.7946 0.0185 0.0415
V2 All Chao1 IL8_Lavage -0.7946 0.0185 0.0415
V4 All ACE IL8_Lavage -0.7946 0.0185 0.0415
V5 All se.ACE IL8_Lavage -0.4870 0.2209 0.3314
V6 All Shannon IL8_Lavage -0.4095 0.3137 0.4033
V7 All Simpson IL8_Lavage -0.1975 0.6392 0.6392
V8 All InvSimpson IL8_Lavage -0.3172 0.4439 0.4994
V9 All Fisher IL8_Lavage -0.6583 0.0759 0.1366
V11 All PD IL8_Lavage -0.8086 0.0151 0.0415
V12 All Observed IL8_Plasma -0.4205 0.1525 0.4576
V13 All Chao1 IL8_Plasma -0.4205 0.1525 0.4576
V15 All ACE IL8_Plasma -0.4205 0.1525 0.4576
V16 All se.ACE IL8_Plasma -0.1413 0.6453 0.6478
V17 All Shannon IL8_Plasma 0.1656 0.5888 0.6478
V18 All Simpson IL8_Plasma 0.2500 0.4101 0.6478
V19 All InvSimpson IL8_Plasma 0.1402 0.6478 0.6478
V20 All Fisher IL8_Plasma -0.2116 0.4878 0.6478
V22 All PD IL8_Plasma -0.2936 0.3303 0.6478
NA NA NA NA NA NA NA NA
NA.1 NA NA NA NA NA NA NA
## [1] "microtable" "R6"
IL8 and Buccal genus abundance Spearman correlations separated by H. pylori status

IL8 and Buccal genus abundance Spearman correlations separated by H. pylori status

IL8 and  Buccal genus abundance Spearman correlations independent of H. pylori status

IL8 and Buccal genus abundance Spearman correlations independent of H. pylori status

Independent of H. pylori status
Oral IL8 spearman
Type Taxa Env Correlation Pvalue AdjPvalue Significance
V1 Swab k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia IL8_Lavage -0.4523 0.3678 0.5676
V2 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Rodentibacter IL8_Lavage 0.1587 0.7639 0.8721
V3 Swab k__Bacteria|p__Firmicutes|c__Bacilli|o__Staphylococcales|f__Gemellaceae|g__Gemella IL8_Lavage 0.6691 0.1461 0.3622
V4 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Moraxella IL8_Lavage 0.0656 0.9017 0.9491
V5 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter IL8_Lavage -0.8228 0.0443 0.3622
V6 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas IL8_Lavage -0.4514 0.3689 0.5676
V7 Swab k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales-Selenomonadales|f__Veillonellaceae|g__Veillonella IL8_Lavage 0.6402 0.1709 0.3622
V8 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Burkholderiales|f__Neisseriaceae|g__Neisseria IL8_Lavage -0.8919 0.0169 0.3382
V9 Swab k__Bacteria|p__Firmicutes|c__Clostridia|o__Peptostreptococcales-Tissierellales|f__Peptostreptococcaceae|g__[Eubacterium]_yurii_group IL8_Lavage -0.6729 0.1430 0.3622
V10 Swab k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus IL8_Lavage 0.2165 0.6804 0.8505
V11 Swab k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium IL8_Lavage -0.6495 0.1627 0.3622
V12 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga IL8_Lavage -0.7938 0.0594 0.3622
V13 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Actinobacillus IL8_Lavage 0.3045 0.5573 0.7431
V14 Swab k__Bacteria|p__Firmicutes|c__Clostridia|o__Lachnospirales|f__Lachnospiraceae|g__Johnsonella IL8_Lavage -0.7313 0.0986 0.3622
V15 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Weeksellaceae|g__Bergeyella IL8_Lavage 0.3131 0.5457 0.7431
V16 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella IL8_Lavage 0.6092 0.1992 0.3622
V17 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella IL8_Lavage -0.6191 0.1900 0.3622
V18 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Burkholderiales|f__Neisseriaceae|g__Alysiella IL8_Lavage -0.1444 0.7849 0.8721
V19 Swab k__Bacteria|p__Patescibacteria|c__Gracilibacteria|o__Absconditabacteriales_(SR1)|f_Absconditabacteriales(SR1)|g_Absconditabacteriales(SR1) IL8_Lavage -0.7323 0.0979 0.3622
V20 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus IL8_Lavage 0.0090 0.9866 0.9866
V21 Swab k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia IL8_Plasma 0.1714 0.6144 0.9928
V22 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Rodentibacter IL8_Plasma -0.5748 0.0644 0.4290
V23 Swab k__Bacteria|p__Firmicutes|c__Bacilli|o__Staphylococcales|f__Gemellaceae|g__Gemella IL8_Plasma 0.2257 0.5045 0.9928
V24 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Moraxella IL8_Plasma -0.2685 0.4246 0.9928
V25 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter IL8_Plasma 0.0581 0.8653 0.9928
V26 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas IL8_Plasma 0.7912 0.0037 0.0490
V27 Swab k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales-Selenomonadales|f__Veillonellaceae|g__Veillonella IL8_Plasma 0.0086 0.9800 0.9928
V28 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Burkholderiales|f__Neisseriaceae|g__Neisseria IL8_Plasma -0.1381 0.6855 0.9928
V29 Swab k__Bacteria|p__Firmicutes|c__Clostridia|o__Peptostreptococcales-Tissierellales|f__Peptostreptococcaceae|g__[Eubacterium]_yurii_group IL8_Plasma -0.0809 0.8130 0.9928
V30 Swab k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus IL8_Plasma 0.0980 0.7743 0.9928
V31 Swab k__Bacteria|p__Fusobacteriota|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium IL8_Plasma -0.4677 0.1469 0.7346
V32 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga IL8_Plasma -0.2721 0.4182 0.9928
V33 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Actinobacillus IL8_Plasma 0.0031 0.9928 0.9928
V34 Swab k__Bacteria|p__Firmicutes|c__Clostridia|o__Lachnospirales|f__Lachnospiraceae|g__Johnsonella IL8_Plasma -0.1446 0.6714 0.9928
V35 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Flavobacteriales|f__Weeksellaceae|g__Bergeyella IL8_Plasma -0.2584 0.4430 0.9928
V36 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella IL8_Plasma 0.2118 0.5318 0.9928
V37 Swab k__Bacteria|p__Bacteroidota|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella IL8_Plasma 0.0311 0.9276 0.9928
V38 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Burkholderiales|f__Neisseriaceae|g__Alysiella IL8_Plasma 0.7770 0.0049 0.0490
V39 Swab k__Bacteria|p__Patescibacteria|c__Gracilibacteria|o__Absconditabacteriales_(SR1)|f_Absconditabacteriales(SR1)|g_Absconditabacteriales(SR1) IL8_Plasma 0.0111 0.9742 0.9928
V40 Swab k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus IL8_Plasma -0.1123 0.7423 0.9928
IL8 and Buccal alpha diversity Spearman correlations independent of H. pylori status

IL8 and Buccal alpha diversity Spearman correlations independent of H. pylori status

Independent of H. pylori status
Oral alpha diversity
Type Taxa Env Correlation Pvalue AdjPvalue Significance
V1 All Observed IL8_Lavage -0.8942 0.0162 0.0365
V2 All Chao1 IL8_Lavage -0.8942 0.0162 0.0365
V4 All ACE IL8_Lavage -0.8942 0.0162 0.0365
V5 All se.ACE IL8_Lavage -0.2750 0.5978 0.5978
V6 All Shannon IL8_Lavage -0.6374 0.1733 0.2600
V7 All Simpson IL8_Lavage -0.4610 0.3575 0.4022
V8 All InvSimpson IL8_Lavage -0.4959 0.3172 0.4022
V9 All Fisher IL8_Lavage -0.9018 0.0140 0.0365
V11 All PD IL8_Lavage -0.7827 0.0657 0.1182
V12 All Observed IL8_Plasma -0.2154 0.5247 0.9733
V13 All Chao1 IL8_Plasma -0.2154 0.5247 0.9733
V15 All ACE IL8_Plasma -0.2154 0.5247 0.9733
V16 All se.ACE IL8_Plasma -0.3212 0.3355 0.9733
V17 All Shannon IL8_Plasma 0.0214 0.9501 0.9733
V18 All Simpson IL8_Plasma 0.0538 0.8751 0.9733
V19 All InvSimpson IL8_Plasma 0.0115 0.9733 0.9733
V20 All Fisher IL8_Plasma -0.1349 0.6926 0.9733
V22 All PD IL8_Plasma -0.1319 0.6991 0.9733
NA NA NA NA NA NA NA NA
NA.1 NA NA NA NA NA NA NA

Record session information

## R version 4.1.3 (2022-03-10)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 20.04.4 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
## 
## locale:
##  [1] LC_CTYPE=C.UTF-8       LC_NUMERIC=C           LC_TIME=C.UTF-8       
##  [4] LC_COLLATE=C.UTF-8     LC_MONETARY=C.UTF-8    LC_MESSAGES=C.UTF-8   
##  [7] LC_PAPER=C.UTF-8       LC_NAME=C              LC_ADDRESS=C          
## [10] LC_TELEPHONE=C         LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C   
## 
## attached base packages:
## [1] grid      stats4    stats     graphics  grDevices datasets  utils    
## [8] methods   base     
## 
## other attached packages:
##  [1] tidytree_0.3.9              RColorBrewer_1.1-3         
##  [3] ggpubr_0.4.0                microeco_0.3.2             
##  [5] magrittr_2.0.3              kableExtra_1.3.4           
##  [7] tidyMicro_1.48              forcats_0.5.1              
##  [9] stringr_1.4.0               dplyr_1.0.9                
## [11] purrr_0.3.4                 readr_2.1.2                
## [13] tidyr_1.2.0                 tibble_3.1.7               
## [15] tidyverse_1.3.1             qiime2R_0.99.6             
## [17] microbiome_1.16.0           ggplot2_3.3.6              
## [19] ComplexHeatmap_2.10.0       DESeq2_1.34.0              
## [21] SummarizedExperiment_1.24.0 Biobase_2.54.0             
## [23] MatrixGenerics_1.6.0        matrixStats_0.62.0         
## [25] GenomicRanges_1.46.1        GenomeInfoDb_1.30.1        
## [27] IRanges_2.28.0              S4Vectors_0.32.4           
## [29] BiocGenerics_0.40.0         phyloseq_1.38.0            
## [31] questionr_0.7.7             BiocManager_1.30.17        
## [33] sjPlot_2.8.10               readxl_1.4.0               
## [35] remotes_2.4.2               devtools_2.4.3             
## [37] usethis_2.1.5              
## 
## loaded via a namespace (and not attached):
##   [1] estimability_1.3       bit64_4.0.5            knitr_1.39            
##   [4] DelayedArray_0.20.0    data.table_1.14.2      rpart_4.1.16          
##   [7] KEGGREST_1.34.0        RCurl_1.98-1.6         doParallel_1.0.17     
##  [10] generics_0.1.2         callr_3.7.0            timeSeries_3062.100   
##  [13] RSQLite_2.2.13         VGAM_1.1-6             bit_4.0.4             
##  [16] tzdb_0.3.0             webshot_0.5.3          xml2_1.3.3            
##  [19] lubridate_1.8.0        httpuv_1.6.5           assertthat_0.2.1      
##  [22] fBasics_3042.89.1      xfun_0.30              hms_1.1.1             
##  [25] jquerylib_0.1.4        evaluate_0.15          promises_1.2.0.1      
##  [28] fansi_1.0.3            dbplyr_2.1.1           igraph_1.3.1          
##  [31] DBI_1.1.2              geneplotter_1.72.0     htmlwidgets_1.5.4     
##  [34] ellipsis_0.3.2         backports_1.4.1        insight_0.17.0        
##  [37] permute_0.9-7          picante_1.8.2          annotate_1.72.0       
##  [40] vctrs_0.4.1            abind_1.4-5            sjlabelled_1.2.0      
##  [43] cachem_1.0.6           withr_2.5.0            checkmate_2.1.0       
##  [46] emmeans_1.7.3          vegan_2.6-2            prettyunits_1.1.1     
##  [49] svglite_2.1.0          cluster_2.1.3          lazyeval_0.2.2        
##  [52] ape_5.6-2              crayon_1.5.1           genefilter_1.76.0     
##  [55] labeling_0.4.2         pkgconfig_2.0.3        zCompositions_1.4.0-1 
##  [58] nlme_3.1-157           pkgload_1.2.4          nnet_7.3-17           
##  [61] spatial_7.3-11         rlang_1.0.2            lifecycle_1.0.1       
##  [64] miniUI_0.1.1.1         modelr_0.1.8           randomForest_4.7-1    
##  [67] cellranger_1.1.0       rprojroot_2.0.3        datawizard_0.4.0      
##  [70] Matrix_1.4-1           carData_3.0-5          Rhdf5lib_1.16.0       
##  [73] boot_1.3-28            reprex_2.0.1           base64enc_0.1-3       
##  [76] GlobalOptions_0.1.2    processx_3.5.3         png_0.1-7             
##  [79] viridisLite_0.4.0      rjson_0.2.21           stabledist_0.7-1      
##  [82] parameters_0.17.0      bitops_1.0-7           rhdf5filters_1.6.0    
##  [85] Biostrings_2.62.0      blob_1.2.3             GUniFrac_1.5          
##  [88] shape_1.4.6            rstatix_0.7.0          jpeg_0.1-9            
##  [91] ggsignif_0.6.3         ggeffects_1.1.2        scales_1.2.0          
##  [94] memoise_2.0.1          plyr_1.8.7             zlibbioc_1.40.0       
##  [97] compiler_4.1.3         clue_0.3-60            lme4_1.1-29           
## [100] cli_3.3.0              ade4_1.7-19            XVector_0.34.0        
## [103] ps_1.7.0               htmlTable_2.4.0        Formula_1.2-4         
## [106] MASS_7.3-56            mgcv_1.8-40            tidyselect_1.1.2      
## [109] stringi_1.7.6          highr_0.9              yaml_2.3.5            
## [112] locfit_1.5-9.5         ggrepel_0.9.1          latticeExtra_0.6-29   
## [115] sass_0.4.1             tools_4.1.3            parallel_4.1.3        
## [118] circlize_0.4.14        rstudioapi_0.13        statip_0.2.3          
## [121] foreach_1.5.2          foreign_0.8-82         gridExtra_2.3         
## [124] farver_2.1.0           scatterplot3d_0.3-41   Rtsne_0.16            
## [127] stable_1.1.6           digest_0.6.29          shiny_1.7.1           
## [130] Rcpp_1.0.8.3           car_3.0-13             broom_0.8.0           
## [133] performance_0.9.0      later_1.3.0            httr_1.4.3            
## [136] AnnotationDbi_1.56.2   effectsize_0.6.0.1     sjstats_0.18.1        
## [139] colorspace_2.0-3       rvest_1.0.2            brio_1.1.3            
## [142] XML_3.99-0.9           fs_1.5.2               modeest_2.4.0         
## [145] truncnorm_1.0-8        splines_4.1.3          rmutil_1.1.9          
## [148] statmod_1.4.36         yulab.utils_0.0.4      multtest_2.50.0       
## [151] renv_0.15.4            sessioninfo_1.2.2      systemfonts_1.0.4     
## [154] xtable_1.8-4           jsonlite_1.8.0         nloptr_2.0.1          
## [157] timeDate_3043.102      testthat_3.1.4         R6_2.5.1              
## [160] Hmisc_4.7-0            NADA_1.6-1.1           pillar_1.7.0          
## [163] htmltools_0.5.2        mime_0.12              glue_1.6.2            
## [166] fastmap_1.1.0          minqa_1.2.4            DT_0.22               
## [169] BiocParallel_1.28.3    codetools_0.2-18       pkgbuild_1.3.1        
## [172] mvtnorm_1.1-3          utf8_1.2.2             lattice_0.20-45       
## [175] bslib_0.3.1            survival_3.2-13        rmarkdown_2.14        
## [178] desc_1.4.1             biomformat_1.22.0      munsell_0.5.0         
## [181] GetoptLong_1.0.5       rhdf5_2.38.1           GenomeInfoDbData_1.2.7
## [184] iterators_1.0.14       labelled_2.9.0         sjmisc_2.8.9          
## [187] haven_2.5.0            reshape2_1.4.4         gtable_0.3.0          
## [190] bayestestR_0.12.1